Polyodon spathula (Mississippi paddlefish): 121302308
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Entry
121302308 CDS
T07273
Name
(RefSeq) fibrillin-2
KO
K23342
fibrillin 2/3
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121302308
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pspa00536
]
121302308
Glycosaminoglycan binding proteins [BR:
pspa00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
121302308
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
FXa_inhibition
EGF
hEGF
TB
EGF_3
Fibrillin_U_N
Plasmod_Pvs28
EGF_FBN_1st
Motif
Other DBs
NCBI-GeneID:
121302308
NCBI-ProteinID:
XP_041088111
LinkDB
All DBs
Position
2:83139848..83244617
Genome browser
AA seq
2870 aa
AA seq
DB search
MGTQWVLKCLLGCIALSGIVVEKISGQDHGKNEKGKFKPDEEKEMTPNRVRRRGQQDVLR
GPNVCGSRFNSYCCPGWKTLPGGNQCIVPICRSSCGDGFCSRPNMCTCSSGQISPTCGSK
SIQQCNIRCMNGGSCAEDHCQCQKGYTGTYCGQPVCENGCQNGGRCIGPNRCACVYGFTG
PQCERDYRTGPCFTQVSNQMCQGQLSGTVCTKTLCCATIGRAWGHPCEMCPAQPQPCRRG
FIPNIRTGACQDVDECQAIPGLCQGGNCINTVGSYECKCPAGHKQSEATQKCEDINECST
IPGVCDDGECSNTVGSYLCTCPPGFVTSADGSRCIDQRVGTCFSSLVNGRCAQDLEGRFT
KMQCCCESGRCWALGSVPEMCPVRGSDEYRRLCIEGIPVGGFPSYRPERPGGGGDTFRPG
VNGFGPRVPTNGGSGPGPSLPEFATLNQTKTTDICKHLPNLCLNGRCIPTPAGYRCECNM
GFKQDGRGECSDVDECTSNPCTNGDCVNTPGSYYCKCHPGFQRTPTKQACIDIDECLQNG
VLCKNGRCVNTEGSFQCICNAGFELTSDGKNCVDHDECATTNMCLNGMCINEDGSFKCIC
KPGFALASNGRYCTDIDECHTTGICMNGRCINTEGSFRCECLAGLAVGVDGRFCVDTHMR
STCYGAIKKGVCVRPFPGAVTKSECCCANADYSFGEPCQPCPAKNSAEFQALCGSGIGFS
VDGTDINECALDPDICSNGVCENLRGSFRCICNIGYESDATGKNCVDIDECAVNRLLCDN
GLCRNMPGSYSCTCPKGYVFRQDSETCEDVNECDSSPCANGVCRNNAGSFSCECSPGSKL
DSTGLICVDSLKGTCWLNIQDGRCEVNINGATLKSECCATLGAAWGSPCERCEIDTACPR
GYARSKGVICEDVNECEVFPGVCPNGRCVNTKGSFQCNCPEGLTLDGTGRMCVDVRVEQC
YLTFDEDECTQPVAGKFRMDACCCSIGSAWGTECEACPEPGSQEYEAICPRGPGFANRGD
ILTGRPFYKDINECKVFSSICSYGKCRNTIGSFRCRCDSGFALDMEERNCTDIDECRISP
DLCGSGTCVNTPGSFECECFEGYESGFMMMKNCMDIDECERNHMLCRGGTCENTEGSYKC
ICPPGHQLSPDGNACVDVNECDLSDNLCKNGKCVNMIGSYQCSCNPGYQATPDRQGCVDI
DECTIKNGGCDTQCSNSEGSYECSCNEGYALMPDKRSCGDIDECEDSPDICDGGQCTNIP
GEYRCLCFDGFMASMDMKTCIDVNECDLNPNICMSGDCENTKGSFICHCQMGYSVKKGTT
GCTDVDECEIGAHNCDMHASCSNIPGSFQCSCQEGWVGNGIKCVDLDECANGTHQCSPNA
RCLNTPGSYRCGCLEGFTGDGYTCSDVDECAENVNLCENGQCLNIPGAYRCECEMGFTPA
PDSKSCQDIDECSFQSICVFGTCKNLPGMFRCICDDGYELDRTGGNCTDIDECIDPINCV
NGLCVNTPGGYQCNCPSDFELNPTGVGCVDTRVGNCYLEFGYRGDGSLACSVEVGVGVSR
SSCCCSKGRAWGNPCEHCPAVNTTEYNTLCPGGEGFRPNPITIILEDIDECQELPGLCQG
GNCVNTFGSFHCECPAGYHLNEESRICEDIDECVTYPGICGPGTCYNTLGNYTCVCPPEY
MQINGGNNCMDMRKSVCYRNYNGTSCENELAFNLTKRLCCCSYNVGKAWNKPCEACPIPA
TSEYRTLCGNIIPGFTFDIHTGKAVDIDECREIPGICANGVCINQIGSFRCECPTGFSYN
DLLLVCEDIDECSNGDNLCQRNADCINSPGSYRCECADGFKLSPNGACIDRNECLEIPNV
CSHGKCVDLQGGYRCACHNGFKATPDQKMCMDIDECERQPCGNGTCKNTVGSYNCLCHPG
FELTHNNDCIDIDECRTLYGQVCRNGQCINSIGSFQCLCEEGYELTPDGKNCVDTNECLT
FPGTCSPGTCQNLDGTFRCICPPGYDVQNENCIDINECDEDPNICLFGSCINNPGSFQCV
CRPGFVLSDNRRRCFDTRESFCFTKFENGKCSVPKAFNTTKAKCCCSKMAKEGWGDPCEL
CPKEGEAAFQELCPFGHGTIPGIGDTREDVNECVENPGICSNGHCINTDGSFRCECPMGY
SLDYTGVHCIDTDECSIGNPCGNGTCTNVIGGFECDCDEGFEPGPMMTCEDINECTQNAL
LCAFRCINTYGGYECTCPAGYALREDRKMCKDLDECSEGLHDCESRGMVCKNLIGTFMCI
CPPGMARRPDGEGCQDENECRTKPGICENGRCVNTVGSYRCDCNEGFQSGPTGTECIDHR
QGFCFTEVLQTMCQMSSSSRNLSTKSECCCDGGRGWGNQCELCPLPGTGHYKKLCPHGPG
YTTDGTDIDECKVMPNLCKNGQCINTMGSFRCLCKLGYNTDITGTTCVDVDECVQSPKPC
NFICKNTEGSYLCSCPRGYILQEDGKTCKDLDECQTKQHNCQFLCVNTIGGFTCKCPPGF
TQHHTACIDNNECASQPSLCGSKGICQNSPGSFSCECQRGYSLDSTGLNCGDVDECESSH
RCQHGCQNMAGGYRCGCPQGYTQHYQWNQCVDENECSNPNSCGSASCYNTLGSFKCACPS
GYSFDEFGSSCQDVNECMSFKTPCNYGCSNTEGGYLCGCPPGYYRVGQGHCVSSMGFNKG
QYLPPGAEADDDNALSPEACYECKINGYSKKDGRKRRSTNETEPSEEERISLASLDIDAP
LKLSLKISELNIHEHILELIPAIEPLTNRVRYAISSGNDIGLFRIHQREGLSYLHTTKKK
SLPGNYTLEITSIPLYKQKELQKLEDSKDRDYLMGELGESLKMRLQIELQ
NT seq
8613 nt
NT seq
+upstream
nt +downstream
nt
atggggacccagtgggtgttgaagtgcttgcttggatgtattgccttatcgggaatcgtg
gtggaaaaaatatcagggcaagatcatggaaaaaatgaaaagggcaaattcaaaccagac
gaagagaaagaaatgacacccaacagagtgagaagaagaggacagcaggatgttcttaga
ggccctaatgtgtgcggatctcgattcaattcctattgctgccctggatggaaaacttta
ccaggaggaaaccagtgcattgttcccatttgccgaagcagctgtggtgatggattttgt
tcacgtcccaacatgtgtacttgttcaagtggacaaatatcgccaacttgtggatcaaaa
tccatccagcagtgcaacatcaggtgtatgaatggtggatcatgtgcagaggaccattgc
cagtgccagaaaggttacacaggaacttactgcggacagcctgtgtgtgagaatggctgc
cagaatggagggcgttgtattggaccaaaccggtgtgcttgtgtgtatggatttacagga
ccacagtgcgaacgagactacagaactggaccatgtttcacccaggtgagcaaccagatg
tgccaaggccagctcagtggcacagtctgcaccaagaccctttgttgtgccactattggg
cgtgcctggggacacccctgtgagatgtgccctgctcagcctcagccctgtcgccgtggg
ttcatacccaacattcgaactggagcttgtcaagacgttgatgaatgccaggcgatccca
ggtctgtgccaaggtggaaactgcatcaataccgtcggttcatatgagtgcaagtgccct
gctggtcacaagcagagtgaggcaacccagaagtgtgaagatataaatgagtgcagcaca
atcccaggtgtctgtgatgacggagaatgctccaacacggttggcagctatttgtgtacc
tgcccacctggctttgtaacatctgcagatggctctcgctgtattgatcagagggtggga
acctgcttctccagcctagttaatggccgctgcgctcaggacctagaaggacgcttcacc
aagatgcagtgctgttgcgagtccggccgttgctgggccctgggttcagtgccagagatg
tgccccgtcagaggctctgatgaatatcgcaggctgtgcattgaaggcatacctgtagga
ggatttccgtcttacaggcctgaaagacctgggggaggaggagacaccttcaggcctggg
gtgaatgggtttggtccaagagtacctacaaacggtgggagtggacctggaccatcactc
cctgagtttgctactctaaatcaaacaaaaacaacggacatctgcaaacacttacccaac
ctgtgcctgaatggacgctgcatccccaccccagccggctaccgctgcgagtgtaacatg
ggattcaagcaggatgggcgaggcgaatgctcagatgtcgatgaatgcacctccaacccc
tgcacaaatggagactgtgtcaacacacctggctcttattactgcaagtgtcaccctggt
ttccaaagaacacccaccaaacaagcctgcatcgatattgatgaatgtcttcagaatgga
gttctatgtaagaatggtcgctgtgtaaacactgaaggcagttttcagtgcatctgcaat
gctggctttgagctaacttctgatggaaaaaactgtgtcgatcatgatgaatgtgccacc
accaacatgtgtctgaatggaatgtgcatcaatgaagatggaagtttcaagtgcatctgc
aaacctggctttgccctggcttcgaatgggcgctactgcacagatattgatgaatgtcac
accacggggatctgcatgaatggccgttgtattaacactgaaggctcgttcaggtgtgaa
tgccttgcaggtctggccgttggggtagatggcagattctgtgttgacacacacatgcgc
agcacttgctatggagccatcaagaagggagtctgtgtccggccgttcccaggagcagtc
accaagtctgagtgctgctgcgccaacgcggattacagcttcggagagccgtgtcagccc
tgcccagctaaaaactcagctgaatttcaagcactctgtggcagtggaattggattctca
gtggatggaacagatatcaatgagtgtgccttggatcctgatatctgctccaatggagtc
tgtgaaaacctccgtggcagcttccgttgtatctgtaacattggctatgaatctgatgcc
actggcaagaactgtgtcgacattgacgagtgtgcagtgaaccggctgctctgtgataat
ggactgtgccggaatatgcctggcagctacagttgtacctgccccaagggttacgtcttc
agacaagactcagagacttgtgaagatgtgaatgaatgtgacagcagtccctgtgctaat
ggagtgtgtaggaacaatgctggatccttctcctgtgaatgttctcctggcagcaaacta
gattctactgggttgatctgcgtggacagcctgaagggaacgtgctggctcaatatccag
gatggccgctgtgaggtgaacatcaacggggcaacgctcaagtctgagtgctgtgccact
ctgggagctgcttggggcagtccatgtgaacgctgtgaaatagatactgcctgtccaaga
ggctacgctagatcaaagggggttatctgtgaagatgtcaacgagtgtgaagttttcccg
ggtgtctgtcccaacggtcgctgtgtgaacacaaagggctccttccagtgtaactgccct
gaaggcctgacattggatggaacaggcagaatgtgtgttgatgtacgtgtagagcagtgc
tatctgacatttgacgaggatgaatgcactcaaccagtggctggcaaattccgaatggat
gcctgttgctgctccattggctctgcctggggcaccgaatgtgaggcttgccctgagcca
ggcagccaggagtacgaggccatctgccccagaggaccaggcttcgccaacagaggggac
attcttacaggcagacccttctacaaagatattaatgaatgtaaagtattttccagcatc
tgcagctatggcaaatgtcgaaacactattggcagttttagatgcaggtgcgacagtgga
tttgcactggatatggaggagagaaattgtactgacattgatgaatgtcgaatctcccct
gacctctgtggaagtggtacctgtgtcaacactccgggcagttttgaatgcgagtgcttt
gaaggatatgaaagtgggttcatgatgatgaagaactgtatggatatcgatgagtgtgag
cgtaaccacatgctatgccggggagggacttgtgaaaacaccgaaggcagctacaagtgt
atttgccccccagggcaccagctttcccctgacggaaatgcctgtgttgatgtcaatgag
tgtgatctcagtgacaacctctgcaagaacgggaagtgtgtgaacatgatcggctcctat
cagtgctcctgtaatcctggataccaggcaactcctgacagacagggatgtgttgacatc
gacgagtgcacaattaaaaatggaggatgtgacacccagtgcagcaattcagaaggcagc
tatgagtgcagctgtaatgagggttacgccctgatgccagacaagaggagctgtggagat
atcgatgaatgtgaggatagccctgatatctgtgatggtggacagtgtactaacatccct
ggagagtaccgctgtctctgttttgatgggttcatggcatccatggatatgaagacgtgt
atagatgtaaacgagtgtgatttgaatcctaacatctgcatgtctggggattgtgagaat
accaagggatccttcatctgtcattgccagatgggttattcggttaagaagggcacaact
ggatgcacagatgtggatgagtgtgagattggagctcacaactgtgacatgcacgcctcc
tgtagcaacatccctgggagcttccagtgcagctgccaagagggctgggtaggaaacggc
attaaatgtgtggatcttgatgaatgtgccaatgggacccaccagtgcagtccaaatgcc
agatgtctgaacacacctggatcgtaccgctgtggctgcttggaaggattcactggggac
ggctacacttgttcagatgtggacgagtgtgccgagaatgtgaatctttgtgagaatggg
cagtgcctgaatattcctggagcataccggtgtgagtgtgagatgggcttcactccagct
ccagacagcaagtcctgccaagatattgatgaatgttccttccagagcatttgtgtattt
ggtacctgtaagaatctgccaggcatgttcagatgcatatgtgatgatggctatgaactt
gatagaacaggaggaaactgcacagacattgatgagtgtattgacccaataaactgtgtt
aacggactttgtgtgaatactcctggaggatatcagtgtaactgcccttctgattttgag
ctgaacccaactggagtcggttgtgttgacactcgtgttggtaactgctacctggagttt
ggctaccgtggagacggcagcctggcctgcagtgttgaggtcggggttggtgtcagtcgt
tcctcctgctgctgctcgaagggaagagcttggggaaacccctgtgaacactgcccggct
gtcaatacaactgagtataacacactgtgccctggaggtgaagggtttaggcccaaccct
attacgattatattggaggatattgacgagtgccaggagttgccagggctgtgccagggt
ggaaactgtgtcaatacctttggcagctttcattgtgagtgcccagctggataccacctc
aatgaagaaagccgaatctgtgaagatattgatgaatgtgtaacctatcctggtatctgt
gggcctggtacgtgctataacaccctgggtaactacacctgcgtctgccctccagagtac
atgcagatcaacgggggaaacaactgcatggacatgaggaagagcgtttgctacagaaac
tacaacggaacttcctgtgagaacgaactggcattcaatctcaccaagaggctgtgctgc
tgttcctacaatgttggtaaagcctggaataagccctgtgaggcgtgcccaatccctgca
acatcggaatatcgcacactctgtggaaatatcatcccaggatttacctttgacatccac
actggaaaagctgttgatattgatgagtgtcgggagatccctgggatctgtgcaaatggc
gtctgcattaaccagattggaagcttccgctgtgaatgccccactggattcagctacaat
gacctgcttttggtctgtgaagatattgatgagtgcagcaatggggataacctctgtcaa
cgcaatgctgactgtatcaacagcccaggcagctaccgctgtgaatgcgctgatggattc
aaactctcccccaacggggcttgcattgatcgtaatgaatgtctggaaattcctaacgtg
tgcagtcatggtaaatgtgtggatctgcaaggaggctatcgctgtgcttgtcacaatggc
ttcaaggcaaccccagatcagaagatgtgtatggatattgatgaatgcgaacgtcagcca
tgtggaaatggaacctgtaagaacacagtgggatcatacaactgtctttgtcatccaggc
tttgaacttactcacaacaacgactgcattgatattgatgagtgcaggaccttatatggg
caggtgtgtcgaaatggccagtgcatcaacagcattggctccttccaatgtctgtgtgaa
gagggctatgagctcacacctgatggaaagaattgtgttgataccaatgagtgcttgact
ttccctggaacatgctctcctggaacatgtcagaaccttgatggaaccttccggtgcatt
tgtcctccaggatatgatgttcagaatgaaaactgcattgacattaatgagtgcgatgaa
gaccccaatatctgcctttttggttcctgcattaacaatcccgggagtttccagtgcgtt
tgccgaccaggattcgtcttgtctgataatagacgcaggtgctttgatacacgagagagt
ttctgcttcaccaagtttgagaatggaaagtgctctgtgccaaaggctttcaacacaacc
aaagcgaagtgctgctgcagtaaaatggctaaagaaggctggggagacccctgtgaactt
tgtcctaaggaaggagaagcggctttccaggagctttgtccatttggacatggtaccatt
ccaggcattggtgacacccgtgaagatgtgaacgagtgtgtggagaacccagggatctgt
tccaatggccactgcattaacacagatgggtccttccgctgtgagtgcccgatgggatac
agcctggactataccggagtccactgcattgacactgatgaatgttcaataggaaatccc
tgtggcaatggtacctgcaccaatgtgattggtggatttgagtgtgactgtgatgaaggg
tttgagccaggcccaatgatgacctgtgaggatatcaatgaatgtacacaaaacgctcta
ctgtgtgctttccgctgtatcaacacatatggaggctacgagtgcacttgtcctgccggc
tatgccctgagggaggataggaagatgtgtaaagatctggatgaatgctcggagggactc
catgactgtgaatccagaggcatggtctgcaagaacctgatagggaccttcatgtgtatc
tgccctccaggcatggcccgcaggcctgatggagaagggtgccaggatgaaaatgaatgc
cgcactaaacctgggatctgtgaaaacgggcgctgcgttaacacagttggcagctacagg
tgtgactgcaacgagggcttccagtctggaccgacaggcacggaatgcattgaccatcgg
caaggcttttgtttcactgaagtcctgcagaccatgtgccagatgtcctccagtagtcgt
aacctctccaccaagtccgaatgctgctgcgatggaggccgaggctggggcaatcagtgt
gagctctgccccttgcctgggactggccactacaagaagctctgtccccatggccctggc
tacactactgatggcactgatattgacgaatgcaaagtcatgcccaacctgtgtaagaat
ggacaatgcatcaacaccatgggctccttccgttgtctttgcaaactgggctacaacact
gacattacaggcaccacctgtgtggacgtggacgagtgtgtccagtctccaaagccgtgc
aacttcatctgtaaaaacacagagggcagttacctgtgctcatgcccacgggggtacatc
cttcaagaggatgggaagacttgtaaagatcttgacgagtgtcaaaccaaacaacacaac
tgccagttcttgtgtgtcaacaccatcggaggatttacatgcaagtgtccaccaggattt
acacagcatcacactgcctgtattgacaacaatgaatgtgcctcccagccttctctctgc
ggctctaaaggaatctgtcagaactctccaggcagtttcagttgtgaatgccaaagagga
tacagtcttgactccactggcctaaactgtggtgatgtggatgagtgtgaaagcagccac
aggtgccaacacggatgccagaacatggcaggagggtaccggtgcggctgccctcagggg
tacacacagcactaccagtggaaccagtgtgtcgatgagaatgaatgttccaaccctaat
agctgtggctctgcctcttgctacaacacccttggcagcttcaagtgtgcctgtccgtct
ggttactcattcgatgaatttggcagcagctgtcaagatgtgaacgagtgtatgtccttc
aagaccccttgcaactatggctgttcaaacacagagggaggttacctctgtggctgtcca
cctggttattacagagtgggacaaggtcactgtgtatccagcatgggattcaacaaaggc
cagtacctgcctccaggggccgaagcggatgatgacaatgccctgtctccagaggcctgt
tacgagtgcaaaatcaatggctactccaaaaaagatggcaggaagaggagaagtaccaac
gaaactgaaccttcagaggaggaacgtatcagcttggccagtttggacatagacgctcct
ctgaagctgagtcttaaaatctcagagctgaacatccacgagcacatcctggagctgatc
cctgcaatcgagccactcaccaaccgtgtgcgttacgccatctcctccggcaacgatatc
gggctgttccgcatccaccagcgcgagggcctcagctacctgcacaccaccaagaagaag
tccttgcctgggaactacacactggagatcaccagtatcccgctgtacaaacaaaaagaa
ctgcagaaactggaagacagcaaagacagagactacctcatgggggagctgggggaaagc
cttaaaatgaggctacagattgagcttcagtaa
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integrated database retrieval system
