Polyodon spathula (Mississippi paddlefish): 121302309
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Entry
121302309 CDS
T07273
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform-like isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03015
mRNA surveillance pathway
pspa04261
Adrenergic signaling in cardiomyocytes
pspa04382
Cornified envelope formation
pspa04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121302309
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
121302309
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
121302309
09158 Development and regeneration
04382 Cornified envelope formation
121302309
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pspa01009
]
121302309
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pspa03019
]
121302309
03036 Chromosome and associated proteins [BR:
pspa03036
]
121302309
Protein phosphatases and associated proteins [BR:
pspa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
121302309
Messenger RNA biogenesis [BR:
pspa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
121302309
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
121302309
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
121302309
NCBI-ProteinID:
XP_041088107
LinkDB
All DBs
Position
29:8354620..8363505
Genome browser
AA seq
451 aa
AA seq
DB search
MAGAGGGGNDVQWCFSQVKGAIDDDVAEADIISTVEFNHSGELLATGDKGGRVVIFQQEP
EVRNNKSQPQCRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTND
KTIKLWKISERDKRPEGYNLKEEDGRYRDPSTVTTLRVPVFRPMDLMVEASPRRVFANAH
TYHINSISVNSDYETYLSADDLRVNLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHP
NQCNTFVYSSSKGTIRLCDMRESALCDKHSKLFEEPEDPSNRSFFSEIISSISDVKFSHN
GRYMMTRDYLSVKIWDLNMESRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGNDSV
VMTGSYNNFFRMFDRGQKKDVTLEASRESSKPRAVLKPRKVCAGGKRKKDEISVDSLDFN
KKILHTAWHPQENIIAVATTNNLYIFQDKLN
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagccggaggcgggggcaatgatgtgcagtggtgcttctctcaggtgaagggg
gccatcgacgatgacgttgctgaagctgatattatttcgacggtggagttcaatcactct
ggagagctgctggcgacgggcgacaagggaggcagagtcgtcatcttccagcaggagcca
gaggtcagaaacaataagagccagccgcagtgccgaggcgagtacaacgtttacagcacc
ttccagagtcacgagccggagtttgactacctgaagagcttggagattgaggagaagatc
aacaagatccgctggctgccccagaagaatgcagcgcagttcctgttgtccacaaacgat
aaaactataaagctgtggaagatcagtgaacgagacaagagaccagaggggtacaaccta
aaagaggaggatgggaggtacagggacccctccacagtcacaacactacgggtgccggtg
ttccggcccatggacctcatggtggaggcgagtccacgcagggtgtttgcgaacgcacac
acctaccacatcaactccatctccgtcaacagtgactacgagacctacctgtctgcggac
gacctgcgcgtcaacctctggcacttggagatcaccgaccgcagcttcaatattgtcgat
atcaagccggctaacatggaggagctgacggaggtgatcacggccgcagagtttcacccc
aaccagtgcaacaccttcgtctacagcagcagcaagggcaccatcaggctctgcgacatg
agagagtctgcactgtgcgacaagcactccaaactgttcgaggagccggaggatcccagc
aacaggtcgttcttctccgaaatcatctcctccatttcggacgtcaagttcagccacaac
gggcgctacatgatgaccagggactacctgtctgtcaagatctgggacctaaacatggag
tcgagaccggtggagacgtaccaggttcatgagtatctcaggagtaagctgtgttctctg
tacgagaatgactgtattttcgacaagtttgagtgttgctggaatgggaatgacagcgtg
gtgatgactggctcctacaacaacttcttccggatgttcgaccgcgggcagaagaaggac
gtgaccctggaagcgtcgcgggagagcagcaagccgcgcgccgtgctgaagccgcgcaag
gtgtgtgctgggggcaagaggaagaaggacgagatcagcgtggacagcctggactttaac
aagaagatcctgcacaccgcctggcacccccaggagaatatcatcgcggtggccaccacc
aacaacctgtacatattccaggacaaactgaactga
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