Polyodon spathula (Mississippi paddlefish): 121302320
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Entry
121302320 CDS
T07273
Name
(RefSeq) nucleolysin TIA-1-like isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pspa03019
]
121302320
03041 Spliceosome [BR:
pspa03041
]
121302320
Messenger RNA biogenesis [BR:
pspa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
121302320
Spliceosome [BR:
pspa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
121302320
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_Nup35
RRM_ACIN1
XOO_2897-deam
Motif
Other DBs
NCBI-GeneID:
121302320
NCBI-ProteinID:
XP_041088130
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Position
29:complement(4985375..5004546)
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AA seq
405 aa
AA seq
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MMMMEDEQPKTLYVGNLSRDVTEALILQLFSQIGPCKSCKMIVDTAGNDPYCFVEFYEHR
HAAAALAAMNGRKIMGNEGPLRSSVNKFVFPSFEVKVNWATTPSSQKKDTSNHFHVFVGD
LSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWL
GGRQIRTNWATRKPPAPKATYDTANAKQLSFEDVVNQSSPSNCTVYCGGVTSGLTEQLMR
QTFSPFGQIMEIRVFPDKGYSFVRFNSHEGAAHAIVSVNGTSVDGHVVKCYWGKETPDMS
PMQQQPQQQQQPLQPQQVQQNKVGFAAAQPYGQWGQWYGNAQQIGQYVPNGWQVPAYGMY
GQAWNQQGFNRSQSPAAWMGANFTVYPAQTPQGHLVAKRAGFQTQ
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatggaagacgagcagccgaagacgctttacgttggaaatctctctcgagat
gtgacagaagctcttatccttcagctgttcagtcagattggaccgtgcaaaagctgtaaa
atgattgtagatactgcaggtaacgacccatactgcttcgtagagttttatgagcaccga
cacgccgcggcagcattggctgccatgaacggaaggaaaataatgggtaatgaaggacca
ttgaggagttcagtaaacaagttcgtatttccctcgtttgaagttaaagtgaattgggca
acaaccccgagtagccagaagaaagacacaagcaatcacttccatgtctttgttggggac
ttgagcccagagataaccacggaagacatcaaggcagcgtttgccccgttcgggagaata
tcggatgccagggtggttaaggatatggctacagggaagtcaaaaggctatggcttcgtc
tctttcttcaacaaatgggatgcagagaacgccattcagcaaatggggggccagtggctc
ggaggcaggcagatcagaacgaactgggctacaagaaagccccctgctcccaaagctact
tacgacactgcgaatgccaaacagttgtcctttgaggatgtggtgaaccagtccagcccg
agcaactgcactgtgtactgtggaggagttacatcaggacttacagagcaactgatgaga
cagacgttctctccttttggacagatcatggagattagagtcttcccagacaagggatat
tcttttgtaaggttcaactctcacgagggggctgcccacgccattgtgtccgtcaacggg
acgtcggtagacggccacgtggtgaagtgctactgggggaaggagactccggacatgagc
ccaatgcagcagcaaccgcagcaacagcagcagcctctccagccgcagcaagtgcagcaa
aacaaagttgggtttgcagcagcgcagccctacggccagtgggggcagtggtatgggaat
gcccagcagattggccagtatgtgcccaacggctggcaagtgcctgcgtatggaatgtat
gggcaagcatggaaccaacagggtttcaatcgatctcagtcccctgctgcatggatgggt
gcaaacttcactgtttatcctgctcagaccccacaaggccatctcgtagctaagagagcc
ggatttcaaacccagtga
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