Polyodon spathula (Mississippi paddlefish): 121302337
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Entry
121302337 CDS
T07273
Name
(RefSeq) AT-rich interactive domain-containing protein 5A-like isoform X1
KO
K25857
AT-rich interactive domain-containing protein 5
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121302337
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Helix-turn-helix
ARID
121302337
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ARID
ATG43
Motif
Other DBs
NCBI-GeneID:
121302337
NCBI-ProteinID:
XP_041088178
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Position
29:complement(7771045..7785504)
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AA seq
694 aa
AA seq
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MAASNPSDRAHKQPDPREVIEADSAEESEESADMESSSSTEEKSGESQSEQEEQEEKSFV
ANLYAFMKERNTPIERIPHLGFKQVNLWRIYKAVEKLGGYDSVTARRLWKNVYDELGGSP
GSTSAATCTRRHYERLVLPFERRLRGEEDKPLPVAKPRKQYKSAKEGKEGERKRKRSNEE
EKAQKSGDCNEVTGQQTGCTRCESGTCLPLPRGSMPAEIRNKPENPNPDRAGTPEESGNR
RAHDDWTANGLRASHSSSNHKGNQTASVCGSSWPIKSLLSNFHLEGSHGGVISPLVKKKL
MAQASEAGSLRFFQAEGSKAGACLQPSSSSPERPSVIHRAQQPELSPGLATSSRASDDGS
PEPPSSPSLSVCSTSEDCTSPPDDCRETPDRPAYYASITSVPCVNGIYKPLSHNPGKDLP
GFLQPPRGFLEVNPYRNLAARNTGRDSREQPTDLSLPRSAWSPDSKGTENGIPSAKYSRQ
PPSSLAGFGPKACWVPPMSSFTKVQPKTGEVVRPIFHPRPGPQAQGFKPHVPQKRMAEDP
DSSAAFEKKLRVVPPLPKDSGDLKGKADLPKPFATHKLLHSQASLHHLSYLLPSYNRTRA
PASYPLEQLKPYSVLPPSLHPLVFPSLPAHLAAPPAASHPPEPLYRHLAVGGEPPFLSPY
ESSPHSSRFYPVHVWHPQASYAIAGLHSLYPSKH
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atggcagcttcgaacccgagcgatcgggcccacaagcagcccgatcccagagaggtgatt
gaggcggacagcgccgaggagagcgaggagagcgctgacatggaatcatccagctccaca
gaggagaagagcggcgagagccaatcggagcaggaagagcaggaggagaagagctttgtg
gccaatctctacgcgttcatgaaggagaggaacacgcccatcgagaggattccacacctg
ggcttcaagcaggttaacctgtggaggatatacaaggctgtggagaaactgggaggatat
gactcggtgacggcccgcagactgtggaagaacgtgtacgatgagctggggggcagcccg
gggagtaccagcgctgccacctgcacccggcgccactacgagaggctggtgctgccattc
gagcggaggctgaggggggaggaggacaagccgctgcccgtcgccaaacctcgcaaacag
tacaagagcgccaaggagggcaaggagggcgagaggaagaggaagagaagcaacgaggag
gagaaggcacagaaatccggcgactgcaatgaggtaacggggcagcagactggttgcacc
cggtgtgagtctgggacctgcctgcccctgcctcgaggatccatgcctgcagaaatacga
aacaaaccagagaacccgaatcctgacagggcaggcactccagaggagtctgggaatagg
agagctcacgatgactggaccgccaacggactgagagcttcccattcgtcatcgaaccat
aaaggaaaccaaacggcttctgtctgcggatcatcctggccaatcaaaagcctgctgtcc
aacttccacttggaaggcagtcatggcggggtgatctccccgctggttaagaagaagctg
atggcgcaggccagcgaggctgggtctctgcgcttcttccaggcagaggggagcaaagcc
ggagcttgtctccagccctcgtcttccagccccgaaaggccctctgtgatccaccgtgcc
cagcaaccggaactcagtcctggcctcgcaacttccagccgggcctctgacgatggatct
ccggagcccccttcttccccaagtctgtccgtttgctccacttctgaagattgcacctcc
ccgccagacgactgcagagagacccctgatcgccctgcctactacgcaagcatcacctcc
gtcccttgcgtgaatggcatctacaaacccctgagccataaccctggcaaggacctgccc
ggcttcctgcaaccccccagggggttcctggaggtgaatccctacaggaatctggccgcg
aggaacacgggcagagattcccgggaacaaccgactgacctcagccttccccggagcgcc
tggagccccgacagcaaaggcacggaaaatggaatcccttctgccaagtacagccgccag
cctccctcctctttggctggctttgggccaaaagcctgctgggttccccccatgtcgagt
tttaccaaagtgcagcccaaaacaggggaggtggtgcgaccaatcttccacccccggcca
ggcccccaagcccagggattcaaacctcacgtgccccagaagaggatggcagaagacccc
gactcctccgctgctttcgagaagaaactgcgggtggtgccccccctgcctaaagactca
ggagacctcaagggcaaagcggatctccccaagccattcgcaactcacaagctgctgcac
tcccaggccagcctccaccacctttcctacctgctccccagttacaacaggactagagcc
ccagccagctaccctctagagcagctcaaaccctactccgtcctgcccccctccctccac
cctctcgtcttcccctccctgccggctcacctagccgcgccgcccgctgcatcgcaccca
cctgagccgctgtaccgccacctagctgtgggaggtgaacctcccttcctctctccctat
gagtcctcccctcacagctcgaggttctatcccgtgcacgtctggcacccccaagccagc
tacgccatcgccggcctgcattcattgtacccctctaaacactaa
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