Polyodon spathula (Mississippi paddlefish): 121302353
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Entry
121302353 CDS
T07273
Name
(RefSeq) transcription factor 7-like 1-B
KO
K04490
transcription factor 7-like 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04310
Wnt signaling pathway
pspa04520
Adherens junction
pspa04916
Melanogenesis
pspa05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
121302353
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
121302353
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
121302353
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121302353
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121302353
Transcription factors [BR:
pspa03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TCF-1
121302353
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTNNB1_binding
HMG_box
HMG_box_2
HMG_WDHD1
TPR_1
TPR_2
TPR_8
Motif
Other DBs
NCBI-GeneID:
121302353
NCBI-ProteinID:
XP_041088205
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All DBs
Position
29:complement(7831601..7866454)
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AA seq
573 aa
AA seq
DB search
MPQLNGGGGDDLGANDEMIPFKDEGEQEEKISENVSAERDLDDVKSSLVNESENNSSSSD
SEAERRPQPTRQDLENYEKAREYFSEALRRQQDGGFFKSPHYPGYPFLMIPDLSNPYLSS
GSLSTGARTYLQMKWPLLDVPGSAGLKDSRASTPGHLSNKVPVVQHPHHMHPLTPLITYS
NEHFSPGTPPSHLSPEIDPKTGIPRTPHPSELSPYYPLSPGAVGQIPHPLGWLVPQQGQP
MYSIPPGGFRHPYPALAMNASMSSLVSSRFSPHMVSHHPHSLHQTGIPHPAIVSPAIKQE
PNQGHLSPSMHPKSPAPLKKEEEKKPHVKKPLNAFMLYMKEMRAKVVAECTLKESAAINQ
ILGRRWHSLTREEQAKYYELARKERQLHSQLYPGWSARDNYGKRKKRKREKQQPDGEPED
QFSSRNKKPCAQYVPPEKTCDSPASSHGSMLDSPATPSVALASPAAPAATHSEQAQPLSL
TTKPAGQAHPPPHHFSLSSKPRGPSPSSTQTGLSLSVGSPGSQSPHILSRPIPFSSLQHA
MLTPPASFHQAALHSHHALLQSQPLSLVTKSAD
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgccgcagttgaacggaggcggtggggatgatttgggggcgaacgacgagatgatcccc
tttaaagatgaaggggagcaggaggaaaaaatctccgaaaatgtttcggcggagagggac
ttggacgacgtaaaatcctcgcttgtgaacgagtcggaaaataacagcagttcgtcagat
tctgaggcggagaggcgccctcaacccacaaggcaggacttggaaaattacgagaaagct
agagagtactttagcgaagctttaagaagacagcaagatggaggattttttaagagtcct
cattatcctggatatccgtttctaatgatcccggatctctcaaacccttacctctccagc
ggctccctctccaccggcgctagaacgtacctgcagatgaaatggccgctcctcgatgtt
cccggctcagccggactgaaggactccagggcatcaacacctggacacttgtcgaacaag
gtcccggtggtgcaacacccccaccacatgcaccccctgacccccctcatcacctacagc
aacgaacacttctccccgggcacccccccctcccacctctctccagagatcgacccaaag
acaggtatcccgaggacgccccacccctcagaactctcgccctactacccgctgtccccc
ggcgctgtggggcagatcccgcaccctctggggtggctggtaccgcagcagggccagccc
atgtactcgatacctccgggggggttcagacacccctacccagctcttgcaatgaatgcg
tccatgtcgagtttggtgtccagtcgcttctccccccacatggtgtcccatcacccacac
agtcttcaccagacgggcatccctcaccctgccatagtctcgcccgccatcaagcaggag
cccaaccagggccacctgagcccctccatgcacccgaagtctcccgcgcccctaaaaaaa
gaggaggaaaagaaaccacacgtgaagaagccactcaacgcgttcatgctctacatgaag
gagatgagggccaaagtggtggcagagtgcacgctcaaggagagcgcagccatcaaccag
atactgggcagacggtggcactccctgacacgagaagagcaagccaagtactatgaactg
gcgcgcaaagaacggcagctccactcgcagctctaccctggctggtcagcacgagataac
tacggcaaaaggaaaaagaggaagagggaaaagcagcagccagatggagagccagaagat
caattctcctcgcggaacaagaagccgtgtgcacagtacgtgcctcctgagaagacgtgc
gacagcccggcctcgtcccacggcagcatgctggactctcccgccactccctccgtggcc
ctggcctctcctgctgcccccgcggccacacactcggagcaggcacagccgctgtccctg
accaccaaaccagcgggtcaggcgcacccccctccccaccacttctctctgtccagcaag
ccccgaggcccctctccttcctccacccaaaccggcctctcgctgtcagttggctctccg
ggcagccaatctccgcatatcctgtcgcggccaatccccttcagctcactccaacacgcc
atgttgactcctcccgcttcctttcatcaggcagccctccattcccaccatgcattgctc
cagtcccagccgttgtccttggtaaccaaatcagctgactaa
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