Polyodon spathula (Mississippi paddlefish): 121302386
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Entry
121302386 CDS
T07273
Symbol
prpf31
Name
(RefSeq) LOW QUALITY PROTEIN: U4/U6 small nuclear ribonucleoprotein Prp31
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121302386 (prpf31)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pspa03041
]
121302386 (prpf31)
Spliceosome [BR:
pspa03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
121302386 (prpf31)
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Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
DUF6200
Motif
Other DBs
NCBI-GeneID:
121302386
NCBI-ProteinID:
XP_041088257
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All DBs
Position
29:19911..32246
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AA seq
506 aa
AA seq
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MSLADELLADLEEARDEEEEERGDGDGGSGLGEESGPELEDIQEEMETDFGGAESVTSIA
KLRHSKGFSDIMQKVGEYVETQRTNSEVTGPVEADPEYRLIVDANNLTVEIDNELNIIHK
FVRDKYSKRFPELESLVPNSLDYIRTVQELGNNLDKCKNNENLQQILTNATIMVVSVTAS
TTQGTMLAEDELIRLVEACDMALELNQSKHRIYEYVESRMSFIAPNLSIIVGASSAAKIM
GTXTQCLSNLSKMPACNLMLLGAQRRSLSGFSTTSLLPHTGYIYHSDIVQALPTDLRRKA
ARLVSAKCTLAARVDSFHESTDGKVGYDLKEEIERKFDKWQEPPPVKQVKPLPAPLDGQR
KKRGGRRYRKMKERLGLTEIRKQANRMTFAEIEEDAYQEDLGFSLGQLGKSGSGRVRQAQ
VNEVTKARISKSLQRTLQKQSMVYGGKSTVRDRSSGTSSSVAFTPLQGLEIVNPQAAEKK
VAEANQKYFSNMAEFLKVKRESDSKP
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgtctctggcggatgagctcttagctgacctcgaggaagcgcgtgatgaggaggaggag
gagagaggagatggggatggaggcagcgggctgggggaggagagcggcccggagctggag
gacatccaggaggagatggagacggatttcggcggagcggagagcgtcacgagcatcgcc
aagctgaggcacagcaaggggttttcagacatcatgcagaaggttggagagtatgtcgag
actcaacggaccaactctgaagtgaccggtcctgttgaagccgacccagagtacagactg
attgtcgatgccaacaacctgactgtggagattgataacgagctgaatatcatccacaaa
tttgttcgtgataagtactccaagcgcttcccggagttggaatcgctggtgccgaactcg
ctggactacatccggactgtccaggagctggggaataacctggacaagtgcaagaacaac
gagaatctgcagcagatcctgaccaacgccaccatcatggtggtcagcgtgacggcgtcc
accacgcagggtacgatgctggcggaggatgagctgatccgattggtggaagcttgtgac
atggccctggagctcaaccaatcgaagcacaggatctacgagtatgtggagtccagaatg
tccttcatcgcgcccaacctgtcaatcattgtgggggcctcatctgctgccaaaatcatg
ggtacctaaacacagtgtctgtctaacctgtccaagatgccggcctgtaacctgatgctg
ctgggagcccagaggagatccctgtccgggttcagcaccacctccctgctcccccacacc
ggatacatctaccacagcgacatcgtgcaggcactgcccacggacctgcgtcgcaaagcg
gcgaggctggtgtcggcgaagtgcacgctggctgcgcgggtggacagctttcacgagagc
actgatggcaaggtgggttatgacctgaaggaggagatcgagaggaagtttgataagtgg
caggagcccccgccagtcaagcaggtgaagccgctgccagcccccctggacgggcagaga
aagaagagagggggccgcaggtatcgaaagatgaaggagcgcttgggtctgactgagatc
aggaagcaagccaaccgaatgacttttgctgagattgaagaggatgcctaccaagaggac
ctgggcttcagtctgggtcagctaggcaagtccgggagcggccgagtcagacaggctcag
gtcaacgaggtcaccaaggccaggatctccaaatcactgcagcgcacgttgcagaagcag
agcatggtatatggaggcaagtccacagtgagagaccgatcttctgggaccagctcgagt
gtggccttcacccccctacagggtctggagatcgttaaccctcaagctgccgagaagaaa
gttgctgaagccaaccagaagtacttctcaaacatggcagagttcctgaaagtcaagcga
gaatcggacagcaaaccctga
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