Polyodon spathula (Mississippi paddlefish): 121302392
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Entry
121302392 CDS
T07273
Symbol
kirrel1a
Name
(RefSeq) LOW QUALITY PROTEIN: kin of IRRE-like protein 1a
KO
K25874
Kirrel/Neph family protein
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pspa04515
]
121302392 (kirrel1a)
Cell adhesion molecules [BR:
pspa04515
]
Immunoglobulin superfamily
Kirrel/Neph family
121302392 (kirrel1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
C2-set_2
V-set
Ig_5
C1-set
Ig_4
DUF3188
Ig_6
DDR
Motif
Other DBs
NCBI-GeneID:
121302392
NCBI-ProteinID:
XP_041088271
LinkDB
All DBs
Position
29:428621..461102
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AA seq
783 aa
AA seq
DB search
MRLLLWIITLTWNLHTVYAAHFSQEPADQTVVSGHSVLLSCVIFNYSGIVQWTKDGLALG
IGEGLRAWPRYRVLRSSDSSEYNLQVSRAELSDDAQYECQATEAALRSRRAKLTVLIPPE
DPVIEGGPEILLTAGIPHNLTCQARAAKPAATIVWHRDGAKQEGAFSTTELMSDRKRETT
LSFLPIVPTDADIGRVFTCHASNEALPAGKETSVKLNVHHPPTVTLSLHPQAVLEGERVV
FTCTASANPEIMGFRWAKGGVILEGEVGSVYEAFVDHSFFTEPVSCEVHNIVGSTNVSTL
VDVHFGPRIVMEPRPTSVDTGSDVTLTCVWSGNPPLTLTWIKKGSNMVLSNNNQLYLKSV
SQADAGQYICKAIVPRIGVGEREVTLSVNGPPIISSESVQYAIRGDKGEVRCFIDSTPTP
DRIAWAWKENILESGTLERYTVERADTGNGVLSTLTINNVIEADFQTQYNCTAWNSFGPG
TAIIQLEETEIVPVGIIAGSTVGASVLLLLCLIALTLFLYRQRKGSRRGVTLGKPDIQVE
TVNKETHNTEDDASSISTATRMVKAMYSPFKDDIDLKQDLRDDNARHTREEYELKDPTNG
YYNVRAAGHEDTRPSSRSMLYTDYRSTAGPPPNPAPESRGGPGGRCYDPRPPSRLSHTSY
AQFNTYNRSGGTGNLNPGLPGSDFASECSGVLDTASQMSYDNYPPTHGYPPSTTTYAPYR
LGFAAPANLANMERLDILGPGYEGFPTGDGGLGKYGTANARYSSASQHSEFGQRHQQRMQ
THV
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttgttattatggattataactttgacgtggaatctgcatacagtatacgctgct
catttttcccaggaacctgcagaccagacggtggtatccggtcacagtgtcctgctgtcc
tgtgtaatcttcaactactccgggatcgtccagtggactaaagatgggctggcactgggc
atcggagaagggctgagagcctggcctcgctatcgggtgctgcgtagctctgactccagt
gagtacaatctgcaggtgtcccgggccgagctgtctgatgatgcacagtatgagtgccag
gccactgaagctgcactgaggtccagacgagccaaactcactgtgctgataccccctgaa
gaccccgtgattgaggggggtcctgagatcctgctgaccgctggaatcccccataacctg
acctgccaggccagggcagccaaaccagcagccacgatcgtgtggcatcgagatggagcc
aagcaagagggggccttcagcaccacggaattgatgtcagacaggaagcgagagacgacg
ctcagcttcctccccatcgtaccgaccgacgcggatattggacgcgttttcacatgccac
gcgagcaacgaagcacttcctgccgggaaagagacctctgtgaagctcaatgtgcaccat
cccccgacggtgactctgtctctccacccgcaggcagtactggagggagagagagtggtc
tttacctgcactgcctctgccaaccctgagatcatgggcttccgatgggcgaaggggggc
gttatcctggagggagaggtggggagcgtgtacgaggccttcgtggatcacagctttttc
accgagccagtgtcctgcgaggtgcacaacatagttggcagcaccaacgtcagcaccttg
gtcgacgtgcatttcggccctcgcatcgtgatggagccacgccccacctctgtggacaca
ggctcggacgtcactctgacctgcgtgtggtcagggaaccctcccctcaccctcacctgg
atcaagaaaggatccaatatggtcctctccaataataaccagttgtatctgaagtctgtc
agtcaggcagacgccggtcagtacatctgcaaagccatcgttccgcggattggagtcggg
gagcgagaggtgaccctgtccgtcaacggacctcccatcatttccagcgagtcggtgcag
tacgcgatcagaggggacaaaggagaagtgaggtgcttcatcgacagcaccccaactccg
gacagaatcgcttgggcgtggaaggagaatattttagagtccggcaccctggagcggtac
accgtggagcgggcggataccggcaacggcgtcctctccaccctgaccatcaacaacgtg
atcgaagcagacttccaaacccaatacaactgcacggcctggaacagctttggacctgga
actgccatcatccagctggaggaaacagagatcgttcctgtcgggattatcgcggggagc
acggtgggggcgtccgtcctcctccttctctgcctgatcgctctgacactgttcctgtac
cgtcagcgcaaaggaagtcggaggggggtgactttgggcaaaccggacatccaggtggag
acggtcaacaaagagacgcacaacacggaggacgatgcctccagcatctccacggcaacc
aggatggtcaaagccatgtactcgcctttcaaagatgacatcgatctgaagcaggacctg
agggacgacaacgctcgacacacacgggaggaatacgagctcaaggaccctacgaacgga
tattacaacgtgcgcgcagccggccatgaggacaccagaccttcctcgcgatccatgctc
tacactgactatagatcaaccgcgggaccccctccgaaccccgccccggagagcagggga
ggaccgggggggcgctgctatgaccccagaccgccctctcgactgtctcacaccagttac
gcccagttcaacacctataaccgaagtggggggactgggaatctcaatcctgggctgcca
gggtcagattttgcttctgaatgtagcggggttctggataccgccagtcaaatgtcgtac
gacaattaccccccgacgcacggctacccccccagcaccaccacatacgccccctacagg
ctgggcttcgcagcgccagccaatctggccaacatggagcgcttggacattctggggccc
gggtatgaaggctttccgacgggagacgggggcttgggaaaatacggcacggccaacgcc
cgctactcctccgcctcccagcactccgagttcggacagaggcaccagcagcgcatgcaa
acccacgtgtga
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