Polyodon spathula (Mississippi paddlefish): 121302393
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Entry
121302393 CDS
T07273
Name
(RefSeq) synaptobrevin homolog YKT6-like
KO
K08516
synaptobrevin homolog YKT6
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04130
SNARE interactions in vesicular transport
pspa04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
121302393
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121302393
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121302393
Membrane trafficking [BR:
pspa04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Ykt6
121302393
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Gene cluster
GFIT
Motif
Pfam:
Longin
Synaptobrevin
Motif
Other DBs
NCBI-GeneID:
121302393
NCBI-ProteinID:
XP_041088272
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All DBs
Position
29:5998312..6010042
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AA seq
198 aa
AA seq
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MKLYSLSVLHKGASKANLLKAAYDLSSFSFFQRTSVQEFMTFTSALIVERSSHGSRASVK
EQEYLCHVYVRNDSLSAVVIADNEYPSRVCFTLLDKVLDEFSKQVDRIDWPSGSPATINY
TTLDGYLAKYQNPREADPMSKVQAELDETKIILHNTMESLLERGEKLDDLVQKSEHLGNT
SKAFYKTARKQNSCCEIM
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgtacagcctgagtgttctccataaaggggcttccaaagccaacctcctcaaa
gcagcctatgacttgtcctccttcagcttctttcagaggaccagtgtgcaggagttcatg
acctttaccagcgccctgattgtggaacgttcatcgcatggaagccgggcgtctgtcaag
gaacaagagtacctgtgccatgtgtacgtgcgtaacgactcgctgagcgcagtggttatc
gctgacaatgagtacccttccagggtctgcttcactctgctcgataaggtattagatgaa
ttctccaagcaggtggacaggatagactggccttctggctctccagctacaatcaactac
acaacactagacggttacctcgccaaataccagaatcctcgggaggctgatcctatgtcc
aaagtacaggcagagctggacgaaaccaaaatcattctgcacaacacaatggagtccttg
ttggagagaggtgagaagctggatgatttagtccagaagtctgaacacttgggaaacaca
tccaaagccttttacaaaactgctcgcaagcaaaactcgtgttgtgagattatgtga
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