Polyodon spathula (Mississippi paddlefish): 121302404
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Entry
121302404 CDS
T07273
Symbol
ncstn
Name
(RefSeq) nicastrin
KO
K06171
nicastrin
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
121302404 (ncstn)
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Motif
Pfam:
Nicastrin
Ncstrn_small
Peptidase_M28
Statherin
Motif
Other DBs
NCBI-GeneID:
121302404
NCBI-ProteinID:
XP_041088286
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Position
29:333349..344939
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AA seq
702 aa
AA seq
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MASLFGKVFVFLILSFHNPGDVSGNAVEQKIYVKLNNTAPCVRLLNSTHQIGCQSSISGD
TGVIHVVEVLSDLDWVLTTGPNPPYMVLLQGELFSRELMMKMKDSPRVAGVAVAIPKTAP
SNGFSPHQSCPNEETGLYSDSYGPQYSRCNQTLWNPLGTGLSYEEFHFPIFMMRDENETS
VIKKCFLDHNAPVNGTVPPSPLCAMQLYSHMHAVTNSATCMRRNDIQMSFSINSDVVCDP
LSDYNIWSSVKPLNTSGQAGPQERVVVATARLDSRSFFWEIAPGAESAVSGFVTLLAVAE
ALAKAAENLTSPLPKNILFAFFQGEVFDYIGSSRMVYDMQKGKFVIGLENIDSVVEIGQV
GLRNGSKLWIHSDPVSRKNSSINDEVNSLVSSLGNASSRLNISVSEAGFSQPLPPASFQR
FLKARPIPGVVLTDHQSAFNNRFYESVYDRADNLRVSYPSGLSPEQQLDFITDTARSLSE
VSTLVARALFLRAGGLQTDLGKIQADTKTVTRMLYGFLIQSNNTWFRSLSSQELQAALVD
RPPQYYVAVSSPAPSTRLVQYVLANLTGTVTNLTQDQCQNPDKTPGSDRELYEYLWVQGA
VPANASQPDQSYCVRAPVRLSKAVSPAFELKDYRSTEYSTWTESRWKDIRARIFLVASKE
LEMMTLGVGITILIVSLLVTYFVSAKADILFTSARETTTAAY
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atggcttctctgtttggaaaagtgtttgtgtttttgattctgagttttcacaatccaggt
gatgtttcaggaaacgcggtcgagcagaaaatctacgtgaagttgaacaacaccgccccc
tgtgttcgtttgctgaactccacccaccagatcgggtgccagtcctctatctctggagac
acgggggtgatccacgtggtggaggttctgtctgatctggactgggttctgacgaccggt
ccgaaccccccttacatggtgctgctgcagggagaactcttcagcagagagttgatgatg
aagatgaaggattcgcctcgtgtggctggcgttgccgtggcgatccccaaaaccgcccct
agcaacggtttctcacctcaccagagctgccccaatgaagagacaggcttgtattcagat
agctatggcccgcagtactctcgttgtaaccagaccctgtggaaccctctggggactggc
ctgtcctacgaagagtttcactttcccatcttcatgatgagagatgagaacgagaccagc
gtcatcaaaaagtgttttctggatcacaacgcccctgtaaacggtaccgtgcccccctcc
ccgctgtgcgccatgcagctgtactctcacatgcacgctgtcaccaactcggcgacctgc
atgaggaggaacgacatccagatgagtttcagcatcaattcagatgtggtttgtgatccc
ctcagtgattataatatctggagctctgtgaagcccctcaatacttccggacaggctggg
ccgcaggagagagtcgtcgtggcaaccgccaggctggacagtcgctcgtttttttgggag
atcgctccgggggcagagagcgccgtgtccgggttcgtgactctgctggcggtcgcagaa
gcgctggccaaagcagcggaaaatctgaccagcccgctccccaaaaacatcctatttgcg
ttctttcagggggaagtgtttgattatattggcagttctcggatggtgtacgacatgcag
aaggggaagtttgtcatcggcctggagaatattgactccgttgtagagataggacaggtg
ggcttgcggaacgggtcaaaactctggattcacagcgaccccgtatcccggaaaaacagc
tccatcaatgacgaggtgaacagtctggtcagctctctcgggaacgccagctccaggttg
aacatctcggtctcagaagctggcttctctcagccacttcccccagcatccttccagagg
ttcctgaaggctcgaccaatccctggcgtcgtcctgacggaccaccaatcagctttcaac
aacaggttctacgagagtgtgtacgacagggcggataacctgagggtcagctaccccagc
ggactgagcccagagcagcagctggacttcatcactgacacggccaggtctctttcagaa
gtctccactctcgttgcccgcgctctcttcctaagggccggggggctgcagacggatctg
ggcaaaatccaggcagacaccaaaacggtgacacgaatgctgtacggctttcttatccag
tccaacaacacctggttcagatctctcagcagccaggagctccaggcggctttggtggac
agaccccctcagtactacgtcgctgtctcgtccccagcgccgtccacccgcctggtccag
tacgtcctggccaacctgaccggaaccgtgaccaacctgacccaggaccagtgccagaac
cccgacaagaccccagggtccgacagagagctctacgagtacctgtgggttcaaggagcg
gtgcccgctaacgccagccagccagaccagtcctactgcgtccgcgcgccggtgcgcctg
tccaaagccgtctccccggccttcgagctgaaggactacaggtccaccgagtactccacc
tggacagagtcccgctggaaggacatccgagccaggatcttcttagtggccagcaaggag
ctggagatgatgacactaggtgtgggcatcactattttaatagtctccttgctcgtgacg
tatttcgtgagcgccaaagcagacatcctgtttaccagcgcgagagagacgaccaccgcc
gcctactga
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