Polyodon spathula (Mississippi paddlefish): 121302430
Help
Entry
121302430 CDS
T07273
Name
(RefSeq) CCR4-NOT transcription complex subunit 3-like isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121302430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pspa03019
]
121302430
Messenger RNA biogenesis [BR:
pspa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121302430
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
121302430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
PI3K_P85_iSH2
DHO_dh
DUF2433
Glyco_hydro_67C
Motif
Other DBs
NCBI-GeneID:
121302430
NCBI-ProteinID:
XP_041088331
LinkDB
All DBs
Position
29:34320..42443
Genome browser
AA seq
135 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVTEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLVENRKLIETQMERFKVVERETKTKAYSKEGLGLALKVDPAQKE
KEEVGQWLTVSQQQH
NT seq
408 nt
NT seq
+upstream
nt +downstream
nt
atggccgataagaggaaactgcaaggtgaaatagatcggtgtctgaagaaggttacagaa
ggtgttgaacagtttgaagatatttggcagaagctccacaacgcagcgaatgcgaatcag
aaagaaaagtatgaggccgatctcaaaaaggaaattaaaaaattacagagattacgggac
caaattaagacgtgggtggcatccaatgagataaaagacaaaaggcagctagtggagaat
cgaaagttaatagaaacgcaaatggagcgtttcaaggtagtggagcgggagaccaagacc
aaggcctattctaaggaggggctgggcttggctctgaaggtggacccggcacagaaagag
aaggaggaagtggggcagtggctcactgtgagtcaacagcagcactaa
DBGET
integrated database retrieval system
