Polyodon spathula (Mississippi paddlefish): 121302474
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Entry
121302474 CDS
T07273
Symbol
dcaf8
Name
(RefSeq) DDB1- and CUL4-associated factor 8 isoform X1
KO
K11804
DDB1- and CUL4-associated factor 8
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121302474 (dcaf8)
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
121302474 (dcaf8)
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Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
ANAPC4_WD40
Beta-prop_RIG_2nd
EIF3I
Beta-prop_EIPR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_VPS8
Beta-prop_HPS5
Beta-prop_IFT140_1st
PROPPIN
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_SPT8
CRT10
Motif
Other DBs
NCBI-GeneID:
121302474
NCBI-ProteinID:
XP_041088412
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Position
29:174038..181096
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AA seq
619 aa
AA seq
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MADEAGKAGLGNGEDKEVQQLQDGSHNPLPTRGGGEEEEEAAGTLPAQSRSGEHVTDGSG
ETSQDKTEEQGGERREEEEEEEEEEEQDSDSMEDTVRYSLTEEAGDSDDRSGGEGGRREL
RRRRRDRSRGRTSSSSDEEIEEDDEDEEEEEEDEQALDDWLDSEIKELGCPGWRAIPELR
AREIGRGLPHFTPRACGARGLVQRFKLQGSLEKHSGCVNTLHFNSSGSRLASGSDDLKVI
IWDWTRKRAVLEFETGHKSNVFQAKFLPHSGDSTLAMCARDGQIRLADLSATQRCKSTKK
VAQHKGAAHKLALDPDSPCFFLSAGEDAVVFGIDLRLDRPATKLVVAKENDKKVGLYTIY
VNPARTHEFAVGGRDQYVRIYDHRKINENENNGVLKKFCPQHLIASESKTNITCLVYSHD
GTELLASYNDEDIYLFDTSHSDGAEYIKHYKGHRNNATVKGVNFYGPRDEFVVSGSDCGH
VYLWEKNSARIVQFMEGDKGGVVNCLEPHPHLPVLATSGLDHDVKIWAPTAETPTGLRGL
KEVMKKNKRERDEDSVRNGDQYDTQLLWFLMRHVRHRRPQRSRRGEAVGTEGDSDESWSS
PDSSDEEETGPDQVQCMSS
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgaagctgggaaagcaggtcttggaaacggtgaggacaaagaggttcaacag
ttgcaggacggctcccacaatcctctgccgacccgaggaggaggggaggaggaggaagag
gcggcaggcacacttcctgcccaaagcagatcgggagaacacgttacagatggaagtggg
gagacatctcaagataaaacagaggaacaaggaggagagcggagagaggaggaggaggag
gaggaggaggaggaggaacaggattctgacagcatggaggataccgtccgatattccctg
actgaggaagcaggagacagcgatgaccggagcggaggagaaggcggccggagagagctt
cgcagacggcgacgcgacaggagccggggacgcacatcctccagctcggacgaggaaatc
gaagaggacgatgaggacgaggaagaggaggaggaagacgagcaagccctggacgattgg
ctggactctgagatcaaagagctgggctgccccggctggagggccatccccgagctcagg
gccagagagatcgggagagggctgcctcacttcactcccagggcgtgcggggcccgggga
ctggtgcagaggttcaagctgcaggggagtctggagaagcacagcggctgcgtgaacacc
ctgcatttcaacagctccggaagcaggctggcctccggcagcgatgacctgaaggtgatt
atctgggactggacgaggaagagagccgtgctggagtttgaaaccgggcacaagagcaac
gtgtttcaggcgaagttccttccccacagtggagactccaccctggccatgtgtgcgcgg
gatgggcagattcgcttggctgacctgtcagccacccagcgatgcaaatccaccaagaaa
gtagctcaacacaaaggagcggcacacaagctggctctggatcctgactctccctgcttc
ttcctgtcagctggagaggatgccgtcgtctttgggattgacttgcgactggaccggccc
gcaacgaagctggtggtcgcaaaagagaacgacaagaaggtgggtctgtacacgatctat
gtgaaccctgcccggacccatgagtttgctgtcggggggcgcgatcagtacgtgagaatt
tatgatcacagaaagatcaatgaaaatgagaacaacggcgttctgaagaagttctgcccg
cagcacttgatcgccagcgagtccaaaaccaacatcacttgtcttgtgtacagccacgac
gggacggaactgctggccagctacaacgacgaagacatttacctgtttgacacgagccac
agcgatggagcggagtacatcaaacactacaagggacaccgaaacaatgcaacagtgaaa
ggggtgaatttctacggtccgcgcgacgagtttgtggtgagtggtagtgactgtgggcac
gtctatctgtgggagaagaactccgcccggattgtgcagttcatggagggagacaaaggg
ggcgtggtgaactgtcttgagccacaccctcacctgcctgttttggccaccagtggtttg
gaccatgatgtgaagatctgggctcccacggcagagacccccactggactgcgagggctg
aaagaggtgatgaagaagaacaagcgagagcgcgatgaagacagcgtgaggaatggcgac
cagtacgacacgcagctgctgtggttcctcatgagacacgtgagacacaggcgaccgcag
aggagccgccgcggagaggccgtgggcaccgagggagattctgacgagtcgtggagttca
ccagactcctcggatgaagaggagaccggacccgatcaagtgcagtgcatgtcctcctga
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