Polyodon spathula (Mississippi paddlefish): 121302502
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Entry
121302502 CDS
T07273
Name
(RefSeq) gastrula zinc finger protein XlCGF7.1-like
KO
K09191
general transcription factor IIIA
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121302502
03021 Transcription machinery [BR:
pspa03021
]
121302502
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
121302502
Transcription machinery [BR:
pspa03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIA
121302502
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_6
zf-C2H2_11
zf-C2H2_15
C2CH-3rd_BIRD-IDD
zf-C2HE
Zn_ribbon_8
zf-C2H2_jaz
zf-met
zf-C2H2_7th_ZNF462
Zap1_zf1
Phage_zn_bind_3
Zn_ribbon_SprT
DUF7128
DUF5795
zf-C2H2_16
zf-LYAR
zf-DNA_Pol
Motif
Other DBs
NCBI-GeneID:
121302502
NCBI-ProteinID:
XP_041088449
LinkDB
All DBs
Position
29:complement(806527..808593)
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AA seq
267 aa
AA seq
DB search
MAFVSMKETEPEPEPTTVKPGDAEEIRVTTSEEETALSALATRRCPECGRTFAHSGHLQT
HRRTHTGEKPYRCSECGKVFSQLGNLKEHWRIHTGETPYQCPDCEKSFTHYGSLRTHRRV
HTGEKPYACSACGKSFGQLEHLRTHGRVHSGEKPFLCSDCGKSFSQGEHLKKHRRTHTGE
KPFQCSHCGLSFSQLENLRKHQPTHTGEKPFQCSECGKCFTRAGTLSQHWRLHTGEKPYR
CARCGEGFTFSNQLRAHCCQRETTATH
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atggcattcgtctcgatgaaagagacggagcccgaaccggaacccacgactgtgaagccg
ggagacgccgaagagatccgggttacgacaagcgaagaggagactgccctctctgccctc
gccacccgccgctgccccgaatgcgggcggaccttcgcccactctgggcacctccaaacc
caccgccgcacccacacgggcgagaaaccctatcgctgcagcgagtgtgggaaggttttc
agccagttgggcaacctcaaagaacactggagaattcacactggggagactccataccag
tgcccggactgcgagaagagcttcacccactacggaagcctacgaacccaccgccgcgtc
cacacgggggagaaaccgtacgcctgcagcgcatgtgggaaaagcttcggacagctggag
cacctccgcacccacggccgcgtccactcgggagagaagccattcctctgctccgactgc
gggaagagtttcagccagggggagcatctgaagaagcacaggcgcacccacactggggag
aagcccttccagtgctcccactgcgggctgagcttcagccagctggagaacctgaggaag
catcagcccacccacactggggagaagcccttccagtgcagtgagtgtgggaagtgtttc
acgcgggccggcaccctgagccagcactggagacttcacacaggggagaagccatatcgc
tgtgctcgctgcggagaagggttcaccttctccaaccagctcagagcgcattgctgccaa
cgggaaactactgccacccactag
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