Polyodon spathula (Mississippi paddlefish): 121302512
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Entry
121302512 CDS
T07273
Name
(RefSeq) V-type proton ATPase subunit B, brain isoform
KO
K02147
V-type H+-transporting ATPase subunit B
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00190
Oxidative phosphorylation
pspa01100
Metabolic pathways
pspa04145
Phagosome
pspa04150
mTOR signaling pathway
Module
pspa_M00160
V-type ATPase, eukaryotes
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
121302512
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
121302512
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121302512
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121302512
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121302512
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Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
ATP-synt_VA_C
ATP-synt_ab_N
SH3_VIII-1_N
Motif
Other DBs
NCBI-GeneID:
121302512
NCBI-ProteinID:
XP_041088460
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Position
29:6400389..6412244
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AA seq
510 aa
AA seq
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MAFKAIRGKVNGVLNEISSSVSGSKAVAREHVQAVSRDYISQPRLTYKTVSGVNGPLVIL
DHVKFPKYAEIVHLTLPDGNKRSGQVLEVSGSKAVVQVFEGTSGIDAKKTSCEFTGDILR
TPVSEDMLGRVFNGSGKPIDRGPTVLAEDYLDIMGQPINPQCRIYPEEMIQTGISAIDGM
NSIARGQKIPIFSAAGLPHNEIAAQICRQAGLVKKSKDVMDYSEDNFAIVFAAMGVNMET
ARFFKSDFEENGSMDNVCLFLNLANDPTIERIITPRLALTTAEYLAYQCEKHVLVILTDM
SSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRNGSITQIPILTMPNDD
ITHPIPDLTGYITEGQIYVDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRKDHADVSN
QLYACYAIGKDVQAMKAVVGEEALTPEDLLYLEFLHKFEKNFIAQGPYENRTVYETLDIG
WQLMRIFPKEMLKRIPQSTLAEFYPRDSKH
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcaaagcgatcagggggaaggtgaacggagtcctgaacgaaatttcctcctcc
gtgagtggatccaaagctgtggcccgggagcacgtacaagccgttagccgggactacatc
tcccagcctcggctcacatataagactgtgtctggtgtcaatgggcctcttgtcatcttg
gatcatgtgaagtttccaaagtatgcagagattgttcatctgacccttccagatggcaac
aaaagaagtggacaggttttggaagtcagtggctcaaaagctgtggtacaggtttttgaa
gggacctccggtatcgatgccaaaaagacaagttgtgaatttacaggcgatatcctgcga
acgccagtatcagaagacatgcttggtcgcgtgttcaatggttcaggaaaacctattgac
aggggcccaacggttctggctgaagattatttggacattatgggccagcctattaacccc
cagtgccgtatctacccagaagagatgatccagacaggtatttctgcaatcgatgggatg
aacagtattgccagaggacagaagattcctatcttttctgcagccggtttgccacacaat
gagattgctgcacagatctgtcgccaagctggtctggttaaaaagtccaaagatgtgatg
gattacagtgaagacaactttgccattgtgtttgctgctatgggtgtaaatatggaaact
gcaagattcttcaagtccgactttgaagaaaatggttcaatggacaatgtgtgtcttttc
ctgaacttggctaatgatccaacaattgagcgcatcatcacgcctcgcctggctctcacc
acagcagagtatctggcgtatcagtgtgagaagcacgttctggttatcctgactgacatg
agctcgtacgcagaagctttgagagaggtttctgctgccagagaagaggtgccaggacgc
cggggcttccctggttacatgtacactgacttggccaccatttatgagagagctggccga
gttgagggcaggaatgggtctattacacagattcctattctaaccatgcccaatgatgat
attactcaccccatccctgatctgactgggtacatcactgaaggtcagatttatgtagac
aggcaactgcacaacagacagatctaccccccgatcaacgtcttgccctctctgtctcgc
ttgatgaagtctgccattggggagggaatgaccaggaaagatcatgccgatgtgtccaat
cagctgtatgcttgctatgcaattggtaaagacgtccaggcaatgaaagcagtggtgggt
gaggaggctctgactccagaggacttgctttatctggagttcctgcataagtttgaaaag
aacttcattgctcaaggtccctatgagaaccgcacagtatatgaaaccctggacatcggt
tggcagcttatgcgtatcttccccaaggagatgctgaaacgaatcccacaaagcaccctg
gccgaattctacccccgagactccaagcattag
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