Polyodon spathula (Mississippi paddlefish): 121302513
Help
Entry
121302513 CDS
T07273
Name
(RefSeq) neurofilament medium polypeptide-like
KO
K04573
neurofilament medium polypeptide (neurofilament 3)
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pspa04812
]
121302513
Cytoskeleton proteins [BR:
pspa04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
121302513
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
DUF1664
Ribosomal_S13_N
Motif
Other DBs
NCBI-GeneID:
121302513
NCBI-ProteinID:
XP_041088461
LinkDB
All DBs
Position
29:complement(5821810..5828083)
Genome browser
AA seq
841 aa
AA seq
DB search
MSYTLETIGSPSYRRMMDTRTSYSRSSTTPSSGFHSQSWSRGSPSSSRSSSFKRTNFAVP
RAYSSTVHSSSNSLDFSQSSVLNGDYKRSNEKEQLQGLNDRFAGYIDKVHYLEQQNKEIE
AEIKALRQKQVTHSQLGNVYDQELGELRAVLEQVNHEKAQIQLDTDHIEEDIHRLKDRYE
EEVRVREDTEATIRAMKKDVEDSALVKVELDKRAQSLQDEIAFLKNNHEEEVGDLLAQIQ
SSQVTVEMKDYLKTDITSALKEIRSQLEGHSSQNLQQAEDWFKCRYSKLTEAADQNKEAI
KSARDEISEYRRQLQSKSIELESVRGTKESLERQLNDIEDRHNSDLTSYQETIHQLDNEL
KGTKWEMARHLREYQDLLNVKMALDIEIAAYRKLLEGEETRFSSFSGSITGPSFPYRQPS
VPVTPAKIHKSKAEPPKLKVQHKFVEEIIEETKVEDEQSEMDMALAAVAEELAAEPAEEE
AEEEGEEEQEEGAKEEEGQEAEEAVEEEVVAISKAAVSASAPEAEAEEEEAAKEDEEEGE
KEEGAEEEEEAEKEEAEKEEGEETLETAEADEEEGEAEGEEKAEEEEEAAGEEEEGEKEE
ESEAVVEEAIVVEKIESTKTSIQETKPEEEQKEASEGEEEKESEKEGEQEQAEEETAETE
TKDEGKAESKEDSGEESEDKKGDEDETAEEEKESKEEAEEETVSKSEAGEVGSEKKESEG
EAVEEVASDAAQKEDTAINGEVVENVEEGSGGEQQDEEEKAVVTNGVDESPSAEDSSQKV
VITKTVETITTTGDGDKQITKSVTVTQTMEEVEQVLEEKLVSTKKVEKVTSQSIKQVTES
E
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgagctatactctggaaacgatagggagcccatcttataggaggatgatggacaccagg
accagttacagccgctccagcacaaccccgtccagcggattccactcccagtcctggtcc
cgaggtagtcccagtagctcgcgctcatcttcctttaagagaaccaactttgccgttccc
agagcgtacagctccactgtccacagctcttccaacagccttgatttcagccagtcctca
gtactcaatggggactacaagcgatccaatgagaaggagcagctccaagggctcaacgac
cgttttgccggctacattgacaaagtgcattacctggagcagcaaaacaaggagatcgag
gctgaaatcaaggctctgcggcagaagcaagtcacccattcccagcttggaaatgtgtac
gaccaggagctcggtgagcttagagccgtcctggagcaagtgaaccacgagaaagcacag
atccagctggatactgaccacatcgaggaagacatccatcgccttaaggacaggtatgaa
gaagaggtgagggttagggaagacaccgaagccaccatccgcgctatgaagaaagatgta
gaagattccgctttggtcaaagttgagcttgataaacgggcgcaatccctgcaagatgaa
atagcttttcttaaaaataaccacgaggaagaggtaggcgatcttctcgctcagatccag
tcttcccaagtcacagtcgagatgaaggactacctgaagactgacatcacctctgccttg
aaggagatccgctcccagctcgaagggcactcttcacagaacctgcagcaggcggaagat
tggttcaagtgccgttactcaaagctgaccgaggcggctgatcagaacaaggaggccata
aaatccgcccgggacgagatctcagagtacaggcgacagctgcagtccaagagcatcgag
ctcgagtccgtcagaggaacaaaggagtctctggagaggcagctgaatgacattgaggat
cgccacaacagcgacctgactagctaccaggagacgatccatcagctcgacaacgagctg
aaaggaacgaaatgggaaatggcgcgtcacttgagggaataccaggacctgctcaatgtc
aagatggctctggatatcgaaatcgcagcatacaggaagctcctggagggtgaagagact
cgcttcagctcattctcaggcagcatcactggtccatcattcccatacagacaaccatca
gtgcccgtaaccccagccaaaatccataaatcaaaagctgagccccccaagttgaaagtc
caacacaagtttgtggaggaaatcattgaggagaccaaggtggaagatgagcagtctgag
atggacatggccttggctgccgtagcagaggagctggctgctgaacctgcagaggaagag
gcagaagaggaaggagaagaggagcaggaggaaggagccaaggaagaggagggacaggaa
gcagaggaggctgttgaagaagaggtggtagccatctcaaaggcagcagtaagtgccagc
gcccctgaggctgaggcagaggaggaggaggctgctaaagaagatgaagaggaaggcgag
aaagaggagggagcagaagaagaggaagaagctgagaaggaagaagctgagaaggaagaa
ggtgaggaaacattggaaacagctgaggctgatgaagaggaaggagaagcagagggagaa
gagaaggcagaggaggaagaagaagcagcaggagaggaagaagaaggagaaaaggaagag
gagagtgaggctgttgtagaagaggccattgtggtggagaagattgagagcaccaaaacc
tccatacaagaaaccaagccagaagaagaacagaaagaggcaagtgagggtgaggaagag
aaagaaagtgagaaagaaggagagcaggaacaggcagaagaagaaacagcagaaactgag
accaaagatgaaggcaaggcagaatcaaaggaggactctggagaagagtctgaagacaaa
aagggagatgaggatgagaccgcagaagaggaaaaagagtccaaggaggaggctgaagag
gagactgtctccaagagtgaggcaggcgaagtagggtctgaaaaaaaggaatccgaaggt
gaggctgttgaagaggtagcatcagatgctgcacagaaggaagacacagccatcaatgga
gaggtggtggagaatgttgaagaaggctcaggtggagagcaacaagatgaggaagagaag
gctgtggtcaccaatggagtagatgagagcccttctgcagaggatagcagtcagaaggtg
gtcatcaccaagaccgtggaaacaattaccaccacaggagatggagataaacagatcacc
aagtctgtgacagtcacccagaccatggaagaggtggagcaggttctggaggagaagctg
gtgtccacaaagaaggtggagaaggtcacatcccagtccataaagcaagtgactgaaagc
gagtga
DBGET
integrated database retrieval system
