Polyodon spathula (Mississippi paddlefish): 121302550
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Entry
121302550 CDS
T07273
Symbol
birc2
Name
(RefSeq) baculoviral IAP repeat-containing protein 2
KO
K16060
baculoviral IAP repeat-containing protein 2/3
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04120
Ubiquitin mediated proteolysis
pspa04210
Apoptosis
pspa04217
Necroptosis
pspa04510
Focal adhesion
pspa04621
NOD-like receptor signaling pathway
pspa05132
Salmonella infection
pspa05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121302550 (birc2)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
121302550 (birc2)
04217 Necroptosis
121302550 (birc2)
09144 Cellular community - eukaryotes
04510 Focal adhesion
121302550 (birc2)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
121302550 (birc2)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
121302550 (birc2)
09171 Infectious disease: bacterial
05132 Salmonella infection
121302550 (birc2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pspa01002
]
121302550 (birc2)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121302550 (birc2)
Peptidases and inhibitors [BR:
pspa01002
]
Peptidase inhibitors
Family I32: IAP family
121302550 (birc2)
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121302550 (birc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BIR
UBA_BIRC2-3
CARD
zf-C3HC4_3
Prok-RING_4
zf-C3HC4_2
zf-RING_2
zf-RING_5
Bap31_Bap29_C
ROS_MUCR
DUF2039
Motif
Other DBs
NCBI-GeneID:
121302550
NCBI-ProteinID:
XP_041088476
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All DBs
Position
30:3804627..3816419
Genome browser
AA seq
629 aa
AA seq
DB search
MGTPFFYLLKMEILKSNTFFMNLMRNNAPVDLRYDHSSELFRMSTFAKFPASGAVLERSL
ARAGFYYTGVGDRVQCFCCKVTVENWQAGECPAERHKRQSPDCPFVQGLASSSSLLSSSH
SAFSPPLQSLLLSQISNSTAPALIEQPVGYFSNRFTSIPPSPLSSHGVEDVCQQRPATSQ
HPRMRREQDRLDTFTNWPLANITPSELAKAGFFYLGQGDRVACFSCGGNLSNWEPGDRAM
SEHQRHYPSCRFARGDGTDNIPLPASIITSLNVSNPVMQLCEERLLTFVNWPTRIPVRPD
QLAKAGFYYVGRNDDVKCFCCDGGLRCWESGDDPWVEHAKWFPRCEYLLQEKGQDFVHQI
QARFPRLFEQLLANGDQSSREFSDPAVVHLGLGEVRSEDAVMMNTPVVKAALDIGFDRNL
VKQTVQSKILSTGENYKTVQELVTDLLNAEDEKREEEKERLAEEMASDGFTFLKRHRLVL
TQRLKSVKSLMDHLREQSEITQKEYDMIISNSSVKQQTAQLLDVVLSKGNAPAEVFKNWI
QKNDIYLLRDLMAQPNEDSPSQDLSDMTMEEQLRRLQEERTCKVCMDKEVNIVFIPCGHL
VVCKECAPSLRKCPICRGMVKGTVRTFLS
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgggcaccccttttttttaccttctcaaaatggagatactaaaaagcaacacattcttt
atgaacttaatgcgcaacaatgccccagtggacctgcgctatgaccattcctctgaactc
tttcgtatgtctaccttcgccaaattccctgccagcggtgccgtgttggagaggagtctt
gcgagagctggcttttattacactggggtgggagaccgtgttcagtgcttctgctgcaaa
gtgacagtggagaactggcaggcaggagaatgccctgctgaaaggcataagcgccagtct
cccgactgcccttttgttcaggggctggcctcaagctccagcctcctgtcttcctcgcac
tccgctttctcccctcctcttcaaagcctcctgctctctcagatctctaactcgactgcc
cccgcgcttattgagcagccagtgggttatttcagcaaccgcttcaccagcatccctccc
agccccttgtcctctcatggcgtggaggatgtgtgtcaacaacgcccggccacctctcag
caccccaggatgcgccgtgagcaagatcgcctggacaccttcacgaactggcccctggct
aatatcaccccctcggagctggccaaggcaggattcttctacctgggacagggtgatagg
gtggcgtgcttctcttgcggtggaaatctaagcaattgggagccaggagacagggccatg
tcagagcaccagaggcactacccctcctgccgttttgcgaggggtgatggaaccgataac
attccccttccggcatccatcatcacctccctcaatgtgtccaatcctgtcatgcagctg
tgcgaggaaagactgctcacgtttgtcaactggccgacaaggattcctgtgcgacctgat
cagctggccaaagctggcttttattacgtgggtcgaaatgatgatgtgaagtgcttctgc
tgcgacggtggattgaggtgctgggagtcaggtgacgacccatgggtggagcatgcaaaa
tggtttccaagatgtgagtatcttctgcaggaaaagggtcaagatttcgtccatcagatt
caggccaggttcccacgtctctttgagcagttgttggcaaacggggaccagagttctcgt
gaattttctgatccagcagtggttcaccttgggctcggagaggtgaggtctgaggatgca
gtcatgatgaacaccccagtggtgaaggcagctctggatattgggtttgaccgaaatctt
gtgaagcaaacggtccagagcaaaatactgagcacgggcgaaaactacaaaaccgtccag
gaactcgtaactgatctcctcaacgctgaagacgagaaaagagaagaagaaaaagagaga
cttgcagaggaaatggcttcagatggctttacctttctaaagaggcatcgtcttgtcttg
actcagcgacttaaaagcgtcaaaagtctgatggatcatttacgagagcagtctgaaata
acccaaaaagaatatgacatgatcatcagcaactcgtcagtcaaacagcagactgctcag
ctccttgacgtagtcctttccaaagggaatgctcctgctgaagtgtttaaaaactggatc
caaaagaatgatatctacttattaagagacttaatggcgcaaccaaatgaggactctccc
agtcaagatctgtcagacatgaccatggaagaacagttgcggaggctgcaagaggaacgc
acctgcaaagtgtgcatggacaaggaagtcaacattgtattcatcccctgtgggcacttg
gtagtctgcaaagaatgtgccccttccctacgcaagtgtcctatctgcagaggcatggtg
aagggcactgtgcgcacattcctgtcctag
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