Polyodon spathula (Mississippi paddlefish): 121302575
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Entry
121302575 CDS
T07273
Name
(RefSeq) uncharacterized protein LOC121302575
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
121302575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121302575
Membrane trafficking [BR:
pspa04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
121302575
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SH3_1
SH3_9
SH3_2
Motif
Other DBs
NCBI-GeneID:
121302575
NCBI-ProteinID:
XP_041088510
LinkDB
All DBs
Position
30:complement(829117..902472)
Genome browser
AA seq
1095 aa
AA seq
DB search
MLRKRFSLRSASAPNLAVQSAEDLTPYSTCETERRGGAVEEVLEPGSTDEDSSPDPSKKT
VCLHSTSNGSSMTSFPRGCSNSSAETALATVDVKPRTLNELNSQNGMVDSVHCSEMDGQE
DKLSPSKIMRFFSTPRKRSSSSAERPRSVIMPGSSPTWNALSSLRKMGSFKKLKSSVFQG
IQARENPELVNEEGLGNGLSKRVPNGVCVRGQNNRLLHSSALQDFKGSGDGLTSDGSDVE
ERDDSFQRTTHRSRSIRRAYGVGRINLLENCKGESHSNCTRPLSPVIQEPRGCPLSDMDS
SKVVYRRSKSIDNLNFLKKSSFKRKSTSNLADPKPANESQRIGRAASTSSMDSDKILGVE
RRSKRWKSPIRAKDFDRVLRLVSGVTDAARRKESPPPPSEPASRTRPNSRLHDDYSRRVS
SSSENERRRGLSPAKTPLKPPAHAEPCILSDTVDTQSPPLVPDAKSNRTPSCLSPDITSP
LSPLSPSSSNNEVFYSEPPVLSNTVDAQSPPLVPDAKSSTAPSCLSPDITSPLSPLSPSS
TNNEVFYSDCEPESASQFAFDAELPSTPVRPTAPKPQSPSTEKLKGNTPFHCPNRHSTLS
LNSMDSEGQAPRAGKSPVCFQELVETVYYDEANEDSGISSHSQQSLNTAPGVEEKSEEVC
TEEQWRGSLAHEEEKPDWHKLAHRRGSAGKGRSRQRPLSDYGQLANRKFSIPEHSVAVES
QDMECTEGEEQTVLSHPHTTTAGGQHRSRKHRPISVIGVSFYSSPKAEEIEDLLLAQPLP
RPPVPSHQVPPYKAVSARFRPFTFSQSTPIGLDRVGRRRQMRASNIAADGGSESSALVDD
NGSEEDYSFEELCQANPRYLQPGGEQLAINELIGDGSTVYAEALWDHVTMDDQELTFKAG
DVIRVLDAANKDWWWGMIEDKEAWFPASFVRLRVNQEDCVAGSVESTQDEEQDPSSSKPR
HKSSENKDQMRTNVIKEIMNTERVYIKHLRDICEGYIRQCKKHTGMFTEAQLGTIFGNIE
EIYKFQRKFLKDLEKQYNKEEAHLSEIGSCFLQHQEGFAIYSEYCNNHPSACAELSMLMK
HSRYRHFFEACQSED
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atgttgagaaagaggttttccttgcggtccgccagtgctccgaacctggcagtgcaatcc
gctgaagacctgaccccgtacagcacatgcgagacagagaggagaggaggtgccgtcgag
gaggtgctggagcccggctccacagacgaggacagcagcccagatccatccaagaaaaca
gtctgcctgcactccactagcaatgggagcagcatgacatcctttccgcgtggctgctcc
aacagcagcgcagagactgctttggccacggtggatgttaaaccgagaactctgaatgag
ctgaactctcagaacggcatggtggacagtgtccactgcagcgagatggacggacaggag
gataagctgagcccttccaagatcatgcgcttcttctccacccctcggaaaaggagcagc
tccagcgctgagcggccccgctccgtgatcatgccgggcagctctcccacctggaacgcg
ctgtcctccctgaggaaaatgggctctttcaagaagctcaaatcttccgtcttccaaggc
attcaagcccgggaaaaccccgagctggtgaatgaggagggcctgggaaacggcctcagc
aagcgggtgccgaacggggtttgcgtccgggggcagaacaaccgcttattgcactccagt
gccctgcaggacttcaagggctcaggggacgggctgacgtcagacgggtcggacgtggag
gagcgggacgactcgttccagaggaccacgcatcgctctcgcagcatccgccgggcttat
ggggtggggcgcatcaacctgctggaaaactgcaaaggggagtcccactcgaactgcacc
agacccctctccccggtcatacaggagccccggggctgccctctctctgacatggacagc
agcaaggttgtgtaccgacggagcaaaagcatcgacaatctcaacttcctgaagaagagc
tccttcaagaggaagtccacctccaacctggctgaccccaagccggcgaacgagagccag
aggattgggagggctgccagcacgtcttccatggactcggataagatcctgggcgtggag
aggaggtccaagcgctggaaaagcccgatcagagcaaaagatttcgaccgtgtgctcagg
ctggtcagcggcgtgacggacgcggccaggaggaaggaaagccccccgcctccaagtgag
ccggccagcaggaccaggcccaacagcaggctgcacgacgactattccaggagagtctcc
agctcctctgagaacgaacgacggcgcggcctttccccagccaagactccgctgaagcct
cctgctcacgcagaaccctgcatactctcagacactgtcgacacacagagtcctcctctg
gttcctgatgctaaaagcaacaggactccctcctgcctgagtccagacatcaccagccca
ctcagccctctcagcccctccagctcaaataacgaggtcttctattcagaaccccctgta
ctctcaaacactgtcgatgcacagagtcctcctctggtccctgatgctaaaagcagcacg
gctccctcctgcctgagtccagacatcaccagtccactcagccctctcagcccctccagc
actaacaacgaggtcttctattcagactgcgaaccagaaagtgcctctcagttcgctttc
gatgcagagctgcccagtaccccagtgaggcccacggctcctaaacctcagagccctagc
actgaaaagctgaagggtaacaccccctttcactgtcccaaccggcacagcacgctgtct
ctgaactccatggacagcgagggccaggctcccagagcagggaagagccctgtgtgtttc
caggaattagtcgagacggtttattatgacgaggccaacgaggacagcgggatcagcagc
cactcgcagcagagcctgaacactgccccgggggtagaggagaagagcgaggaggtttgc
acagaggagcagtggagagggtctctggcccacgaggaagagaaaccggactggcacaag
ctggcccatcgaagagggagcgcaggcaaaggcaggagtcggcagcggcctctgtcggac
tacggccagctggccaacaggaagttctccatccctgagcacagtgtagcggtggagtcc
caagacatggagtgcacagagggagaggagcaaaccgtcctgtcccacccccacaccacc
accgccgggggccagcacaggagcagaaaacacagacccatctccgtcatcggagtcagc
ttctactccagccccaaggcagaggagatcgaggacctcctcctcgcacaacccctccct
cggcctccggttccttcacaccaggtgccaccttacaaagcggtctccgccagattccga
cctttcaccttctcccagagcactcccattgggctggatcgagtgggccgcaggaggcag
atgagagcctcgaacatcgctgctgatggaggctccgagtcctcagctctagtggatgac
aatgggagcgaggaggactacagcttcgaagagctctgtcaggccaaccccaggtacctg
cagccaggaggggagcagctggctatcaacgagctgatcggtgatggcagcacagtgtac
gcagaggcgctgtgggatcacgtcaccatggacgatcaggagctaacgttcaaagctgga
gatgtcattcgggtcctcgatgccgccaacaaggactggtggtggggaatgattgaggac
aaggaggcctggttccctgcaagctttgtcagactgcgtgtgaaccaggaggattgcgtg
gcaggaagcgtggagagcacccaggatgaggaacaagacccctcctccagcaaaccccgg
cacaagagctccgagaacaaagaccagatgaggaccaacgtcatcaaagagatcatgaac
acggagagggtctacatcaaacacctgagggacatctgcgagggctatatcaggcagtgc
aagaaacacactggcatgttcaccgaagctcagcttggcaccatttttggcaacatcgaa
gaaatctacaaattccaaaggaagttcctgaaggaccttgagaagcaatacaacaaagag
gaagcacacctgagtgagataggctcctgcttcctacagcaccaggaaggctttgccatc
tactcggagtactgtaacaatcaccccagtgcctgtgccgagctctccatgctgatgaag
cacagccgctaccggcacttcttcgaggcgtgccagagcgaagattag
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