Polyodon spathula (Mississippi paddlefish): 121302583
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Entry
121302583 CDS
T07273
Name
(RefSeq) contactin-5-like
KO
K06761
contactin 3/4/5/6
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pspa04515
]
121302583
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pspa00537
]
121302583
Cell adhesion molecules [BR:
pspa04515
]
Immunoglobulin superfamily
Contactins
121302583
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pspa00537
]
Others
121302583
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
Ig_5
Ig_4
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
C2-set
Motif
Other DBs
NCBI-GeneID:
121302583
NCBI-ProteinID:
XP_041088519
LinkDB
All DBs
Position
30:3636650..3666296
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AA seq
639 aa
AA seq
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MGEYEPKIEVNFPLTVTAARGVTVKLECFALGNPVPTISWRKVNGNIPSKARLRKSQAVL
EIPNVQLDDSGTYECKAENSRGKNIFRGQLQVYTYPQWIRMINDTQLDSGEQLHWDCKAT
GKPRPSYRWLWNGAPLLSRNRTEMVNGELLIKSLRQSDAGMYQCVAENKHGAIYSSAELK
ILASAPSFQPIPERKIVTVIAGKDIVLECKPQASPKPDITWKKGDRRIPPNKRISVVEDN
SLRIVNSTKSDEGSYVCRGENQFGSAEMTTTVRVKEPTRMQLAPSRMEVTVGESVVLNCK
AFHDPSLDVSFLWLQNREPINFHKEGGHFENIGAPVSEEFQNGEGFGYIVAFRANGTRGW
KEKMVTSADASKFIYRDETVPPLTPFEVKVGVYNNKGDGPFSNIVTVYSAEGEPREAPSD
VKAASVSSSEIIVVWRPPNPAPGRPKNYEVNYWKDMEQEESGERMKTPGNETTILLTGLE
GNTLYHITVKGYNSAGQGPASTAVRAKTKKSPPSQAPGNLMGIQDGDRVSLGWEAVKPLD
NESDVMGYKVLFRQEGQSSSEVIETNISSAVVPLSGGGIYIIEVRAFSEGGEGTASSQIR
VPVSSGVRVPNHQRSMHSISTCSVTVTILLVFVIPSASW
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgggagaatatgagcctaaaattgaggttaattttccgttgacagtcactgctgccagg
ggagtcactgtaaagctggagtgctttgctttagggaaccctgttcccacgatctcgtgg
aggaaggtgaatgggaatatccccagcaaggcgaggttgcgcaagtcccaggcggtcctg
gagatcccaaatgtgcagctggacgactcggggacgtacgagtgcaaagcagagaactct
cgaggaaagaacatcttccgcgggcagctccaggtgtacacttatcctcagtggattcgg
atgattaatgacacccagctagacagcggggagcagctccattgggactgcaaggctaca
gggaagccacgacctagctaccgctggctctggaacggtgcaccgctgctgtcacggaac
agaacagagatggtcaatggcgagctgttgattaagagtctacgtcagtcggacgctggg
atgtaccagtgtgtggcagagaataaacacggagccatttattccagtgcagagttgaag
attttagcttctgctcccagtttccagccaatcccagaaaggaaaatagtcacagtgatt
gctggtaaagatattgttcttgagtgtaaacctcaagcatctccaaaaccagacatcacc
tggaaaaaaggagaccggaggattcctccaaacaagcggatttcagttgtggaggataat
agtctcaggattgtgaattctaccaaatccgatgagggcagctatgtgtgccgaggggag
aatcagtttggctcagccgaaatgaccaccacagtgcgggtaaaagagcccacacggatg
cagcttgcaccgagtcgaatggaggtgacagtgggtgaaagtgtggtcctcaactgcaag
gcatttcacgacccctccctggatgtgtcatttctatggttacagaacagagagcctatc
aactttcacaaagagggaggacattttgaaaacatcggggcaccagtgtcagaagaattt
cagaacggtgaaggcttcgggtacattgtggctttcagagccaatggcacgcgaggatgg
aaagagaaaatggtgacatcagcagacgcctcaaagttcatctaccgcgatgagactgtc
ccccctctgactccctttgaggtgaaggtcggagtttataacaacaaaggggatgggccc
ttcagcaacattgtcacagtctactcagcagagggagaacccagggaagccccttcggat
gtgaaagctgccagtgtgtcgtcctctgagatcatagtggtgtggaggcctccgaatcca
gccccaggacgaccaaagaattatgaggtgaactattggaaggacatggagcaggaagaa
tctggggagagaatgaaaacccctggaaatgaaacaaccatcttactgacagggttagag
ggaaacaccttgtatcacatcaccgtgaagggctacaacagtgccggccaggggccagca
agcacagctgtgcgtgcaaaaaccaagaaatcacctcccagtcaagcacctggcaatctc
atggggatccaagatggagatcgtgtgtcacttggctgggaggccgtcaagccgctcgat
aatgaatcagacgtgatggggtacaaggtcttgtttcgacaagagggccagagcagcagt
gaggtgattgagacgaacatctcctctgcggtggttccactatcaggtggagggatttat
atcattgaggtgcgagcattcagcgagggaggagagggaacagccagctcccaaatcaga
gtacctgtatcatcaggtgtcagagttccaaaccaccaaagatccatgcacagtatatcc
acttgttcagtgacagtgaccattctcttagtttttgtcattccttcagcatcatggtga
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