Polyodon spathula (Mississippi paddlefish): 121302626
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Entry
121302626 CDS
T07273
Symbol
usp25
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 25 isoform X1
KO
K11849
ubiquitin carboxyl-terminal hydrolase 25 [EC:
3.4.19.12
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pspa01002
]
121302626 (usp25)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121302626 (usp25)
Enzymes [BR:
pspa01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
121302626 (usp25)
Peptidases and inhibitors [BR:
pspa01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
121302626 (usp25)
Ubiquitin system [BR:
pspa04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
121302626 (usp25)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
Chlamy_scaf
Motif
Other DBs
NCBI-GeneID:
121302626
NCBI-ProteinID:
XP_041088566
LinkDB
All DBs
Position
30:complement(28187..49546)
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AA seq
890 aa
AA seq
DB search
MQELRHVFSLLVGSKRKYVDPSRAVEILKDAFKATDSQQQDVSEFTHKLLDWLEDAFQMK
AEEERVREGEKPKNPMLELFYGRFLAVGVHEGKRFENTELFGQYPLQVNGFKDLHECLEA
AMIEGEIESLHSENSAKSGQEHWFTELPPVLTFELSRFEFNQALGRPEKIHHKLEFPSVL
YMDRYMDKNREITRLKREEIRRLKEHLTILQQRLERYLSYGSGPKRFPLADVLQYALEFA
SSKPVCTSPLEDIEAPPGGTTASQAAPSTAEHAPCSSPEAPPPPPPPSQQRSVIYKPFTQ
SRIPLDLPMHPAPRHVTDEELGVLEGCLQRWRSEVEQDTRDLQGSISRIHRTIELMYSDK
SMMQVPYRLHAVLVHEGQASAGHYWAYIHSQPQGRWMKYNDISVTKSSWEELVRDSFGGY
RNASAYCLMYIDEKKPFLIREEFDKETGQMLTGFDKLPPDLKEYVKEDNQRFVKEIEEWD
ALQVKKAQQERLAAEATEATASQAAAKEPAPTVTAAPPQDPEYMEQPSPADESKQLKEDT
ERAIAKAAAEHEDGGPEALLQASEAPAKPPASQRVVEVAIPHVMLTPAMQGILMAIDRTR
SVSDRCGPEAAFFKAFTMEYARLLRFAQEDTPPETDHRLQHVLVYLIQNHAPKSILERTL
LEQFAHHSLGFDQRCKSIMEVARAKLELIKPEEVNMEEYEIWHQDYRNFRETTFYLLTGL
ELFQKRSYAETLMYLIYAHQYNKELLLKGSYRGHSEELIAHYRRQCLLKLNEHAARLFES
GEDQEVANGLNIMNELVVPCLPLLLVDEMEEKDIIAVEDMRNRWCSYLGQEMEARLQEKL
TDFLPKLLDCSTEIKSFRDPPKLPSYCTLELCERFSRVVCSLSRSPADGK
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atgcaggagttgaggcatgtgttctcactcctggtaggatccaaaaggaaatacgttgac
ccctccagagctgtagagatcctcaaagatgctttcaaggccaccgactctcagcagcaa
gatgtcagtgagttcactcacaagctgctggactggttagaggatgccttccagatgaaa
gcagaagaggagagggtaagagaaggggagaagccgaagaacccaatgctggagcttttc
tacgggaggttcctggccgtgggtgttcacgaaggtaagaggtttgagaacacagagttg
tttggccagtaccctttgcaggtgaacgggttcaaagatctgcacgagtgccttgaggct
gccatgatagaaggggagattgagtctttgcactcggaaaactctgcaaagtccggacag
gagcactggtttactgagcttcccccggtgctcacatttgaactgtcccgattcgagttt
aatcaagctctaggaaggcctgagaagatacaccacaagctggagttcccctcagtgttg
tacatggacaggtatatggacaagaaccgagaaataacacgtctcaaacgtgaagagatc
cggaggctgaaagagcacctgacgatattacagcaacgcctggagaggtacctgagctat
ggatctggccccaaacggtttcctttagcggatgtccttcagtatgcattggagttcgct
tccagtaaaccagtgtgtacctcaccactggaagacatcgaagcgccacctggtggtaca
acagcttcacaggcagcaccaagcacagcagagcatgctccctgttcatcaccagaggcc
cctcctcctcctccgcccccctcacagcagaggtccgtcatttacaagccgttcacgcag
tcccgcatccccctggacctgccgatgcacccggcccctcggcacgtcacagacgaggag
ctcggggtgctggaggggtgcctgcagcgctggaggagcgaggtggagcaggatactcga
gacctgcagggaagcatttcaagaatacaccgaacgattgaactgatgtactctgacaag
tctatgatgcaagttccttatcggctgcatgctgttctggtgcatgaaggccaggccagc
gcagggcactactgggcgtacatccacagccagccccaggggaggtggatgaagtacaat
gacatctctgttacaaagtcttcctgggaggagcttgtgcgggactccttcgggggttac
aggaacgccagcgcttactgcctaatgtacatcgatgagaagaagccgtttctgatcaga
gaggaatttgacaaggagactggtcagatgctgacggggtttgacaagttacccccagat
ttgaaagagtatgtgaaggaggacaaccagaggtttgtgaaagaaatcgaggaatgggac
gccctgcaagtgaagaaagcacaacaggagagactggcagcagaagcaacagaggccaca
gcatcacaggcagcagccaaggaacctgctcccacagtcactgcagccccacctcaggat
ccagagtacatggagcagccttcacccgcagatgagtccaagcagctgaaggaggacacg
gaaagagccatcgccaaagcagctgcggagcatgaagacggaggtccagaggcgctcctg
caggcaagtgaagccccagccaagccccctgcctcccagcgagtggtagaggtggccatc
cctcacgtcatgctgaccccagccatgcagggtattctcatggccatagacagaaccagg
agtgtgtctgacaggtgtgggcccgaagcagctttctttaaggctttcacaatggaatat
gcccgtctgctccgattcgctcaggaggacacgcctcctgagactgaccaccggctgcag
catgtcctcgtgtatctcattcagaatcacgcccccaagagcatcctggagagaacctta
ctggagcagtttgcacaccacagcctgggctttgaccaacgatgtaagagcattatggaa
gtcgcacgtgctaaactggaactcataaagccagaagaagtgaatatggaagagtatgag
atttggcaccaggattaccgcaacttccgggaaacaaccttttaccttctgacgggtttg
gaactgttccagaagaggagttacgcggagacgctgatgtacctgatctacgcccatcag
tacaataaggagctgcttttgaaaggatcctaccggggacacagcgaggagctgatagca
cattacaggagacagtgcttgctgaaattgaacgaacatgctgccaggctcttcgagtcc
ggagaggatcaggaggtggcgaatggcttgaacatcatgaacgagctggtggttccttgc
ttgccgctgttactggttgatgaaatggaggagaaggacattatcgcagtggaggacatg
aggaaccgctggtgctcatacctggggcaggaaatggaagcgaggctgcaggagaagctg
acggacttccttcccaagctgctggactgctccaccgagatcaaaagcttccgggacccc
ccaaagcttccttcctactgcaccctggaactgtgtgagcgtttcagtcgagttgtgtgc
tctctcagccgcagtcccgcggacgggaaatga
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