Polyodon spathula (Mississippi paddlefish): 121302652
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Entry
121302652 CDS
T07273
Name
(RefSeq) arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1-like isoform X1
KO
K18439
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121302652
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121302652
Membrane trafficking [BR:
pspa04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
121302652
Endosome - Golgi transport
Arf GTPase associated proteins
121302652
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
121302652
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PH
RA
PH_9
PH_11
Motif
Other DBs
NCBI-GeneID:
121302652
NCBI-ProteinID:
XP_041088610
LinkDB
All DBs
Position
30:4423649..4445326
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AA seq
848 aa
AA seq
DB search
MQSSDVGETLSLVFCGANVNCDTGDPDCPSPVSLAKSFEQKLQMEFLAQNKNTEIPRSEV
GCHLDRQYYVAPPSITHNGFLFKTGSVGKPITERKAKEEFSQRWCTLNDGVFSYFESPRN
STPNGDLRMKEIACLAVSVPETHGYDHTFEIYTDSERLYLFGTDNSDAMREWVKSIAKSF
IPSSAEDLLNRDFERIGRLQYKDGLNLQSPRVGWFALVGSTLHVCFEDSEEEEAIHLKKL
QELSIQQENEVLVLVERRRTLYIQGERKLDFQGWCSSIQRAARSSGHTLCEQQLTEGDIP
VIVDRSIDYITQCGLTSEGIYRKSGVNSKIAALLESFRQDARNVRLKEGEHQVDDVSNVL
KRFFRDTEEGMFTSEAANDWLSTPAVADDCQRVLRYQTLLSNLPRVNKATLRALVNHLYC
VQCFSDINQMNLHNLAIVFGPTLFQTDGKDYNAGRVVEDLISHYVAIFNVNEQQLQKQLD
EISAIIKLRDINSSSKVPPAGDFICTVYLEEKKETAEQHIKIPATMTAAELAFEILDRRK
ITVREKDYWCCFEVNEKEETERSLHYQEKVLPILHSLGTESYLVVKKHFSMEAMLIYLAS
KVDDSKHGMIKFREDRHLLGLGLSAFHDRYFILNRTSLRLFKEVRSLQKLQKAEQQCSHR
PEKEWTVKSLKIYQGIKKKLRPPTCWGFTVVYANEKHEKQQWYLCCDTQTEMREWLSTFL
SIQHDGNVWPSDSMKVRASRVPLDARLGNISLIPLRGSENEMRNSVAAFAADPLAVSPIN
QSINQSSQLNYTPPIIPGRDWCFACSGISIMVFLFHYDKSSVFTLAPSSFFKALGLVGLL
YSHPNLNS
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcaagcgatgttggtgagacgctctccctagtgttttgtggggcaaatgtgaac
tgtgacacaggagacccggactgcccctcccctgtctccctggccaagagctttgagcaa
aaactgcagatggagttcctggcccagaacaaaaacacagagatcccgaggtcagaggtg
ggatgtcacctggacaggcaatactatgtggctccaccctcaatcactcacaatggattt
ctgttcaagacagggtcagtgggaaagccaattacagaacggaaagctaaagaagagttc
agccagcgttggtgcaccttgaatgatggggtttttagttacttcgagagccctcggaat
tccacccccaatggggatctcagaatgaaagagattgcatgccttgctgtcagtgttcca
gaaacacatggttacgatcacacgtttgagatttacacagactcggaacgcctctatctg
tttgggacagacaactcggatgctatgagagagtgggtgaaatccattgccaagtcgttt
atcccgtccagtgcggaagacttgctgaatcgggattttgagcggatcgggcgactgcag
tacaaagacgggttgaacctccagagccccagggtgggctggtttgcattggtgggctcc
actctgcatgtctgctttgaggacagcgaagaggaagaagctatccatctgaagaagctg
caagagctctcgattcagcaagaaaatgaagtgctggttttagtggagaggaggaggacc
ctgtatatccaaggggaacggaagctggatttccagggctggtgtagctccatacagagg
gcagccaggagctcgggacatacgctatgcgagcagcagctaacagagggtgacatcccc
gtgatagtggacaggtcaatcgactacatcacgcagtgtggcctgacctcagaagggatc
taccggaagagtggagtgaactccaagattgcagcgctgctggagagtttccgccaggat
gcacggaacgtgcgcctgaaggagggcgagcaccaggtggatgacgtctccaacgtgctc
aagaggttcttcagagacacagaggagggcatgttcaccagcgaggctgcaaacgattgg
ctcagcacgccagctgtggcagatgattgccagagggtccttcgttatcagacactgctc
agcaacctgccacgagtcaacaaggccactctgagagcccttgtcaatcacctctactgt
gtccagtgcttttcagacataaaccagatgaacctccacaacctggccatcgtattcggt
cccacactcttccagacagacggcaaggactacaatgcagggagagtcgtcgaggacctc
atcagccactatgtggccatttttaatgtcaacgagcaacagctccagaaacaactggat
gaaatctcagccatcattaaattacgggacatcaactctagcagtaaagtgcctcccgct
ggtgatttcatatgcacagtttaccttgaagaaaaaaaggagacagctgagcagcacata
aagatcccagccaccatgacggcagcagaactggcttttgagatccttgaccgcaggaaa
atcactgtccgagagaaggattactggtgctgcttcgaggtgaatgagaaggaggagaca
gagcgttccctgcactaccaggagaaggtgttgcccattctgcactctttgggcactgaa
agctacctagtggtgaagaagcacttctctatggaagccatgctcatctacctagcaagc
aaagtggatgactcaaaacatggcatgataaagttccgtgaggacagacatttgcttggc
ctcggcttgagtgctttccatgatcggtacttcatattgaacagaacgtcactgcgactc
tttaaggaagtccggagtcttcaaaaactgcaaaaggcagagcagcagtgcagtcacaga
ccagagaaagagtggacagtcaaatctctcaagatataccagggaatcaaaaagaaactg
cgaccaccgacctgttggggttttacagttgtatatgcaaatgagaaacatgaaaaacag
cagtggtacctgtgctgtgacacccagacagagatgagggagtggctttccacctttctg
agtatacagcacgacgggaatgtgtggccctcggactcgatgaaggtgcgtgcatcccgg
gttcctctggacgccaggttgggtaacatctctctgatcccgttgaggggcagtgagaat
gagatgagaaacagcgtggctgcttttgctgctgatccgcttgctgtgagtccaatcaat
caatcaatcaatcaatcaagccaattaaattacacgcctcctataattccaggaagagat
tggtgttttgcttgttcaggcatttcaataatggtgttcctttttcattacgacaaatcc
tctgtctttaccctggctccttcctccttttttaaggctcttggcttggtaggactgctg
tacagccatcctaatttgaactcgtaa
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