Polyodon spathula (Mississippi paddlefish): 121302702
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Entry
121302702 CDS
T07273
Name
(RefSeq) semaphorin-6A-like isoform X1
KO
K06842
semaphorin 6
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
121302702
NCBI-ProteinID:
XP_041088729
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Position
2:85477781..85535116
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AA seq
1034 aa
AA seq
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MRSEALLLYFTLLQIAGAGFPEDSEPISIAHGNYTKQYPAFVGHKPGRNNTQRHKLDIQL
IMIMNRTLYIAARDHIYTVDMDTSHSEEIFFNKKLTWKSRQADVDTCRMKGKHKDECHNF
IKVLLQKNNDTLFVCGTNAFNPSCKTYKMDSLDIHGEEISGMARCPYDAKHANVALFANG
KLYSATVTDFLAIDAVIYRSLGDSPTLRTVKHDSKWLKEPYFVQAVNYGDYIYFFFREIA
VEYNSMGKVVFPRVARVCKNDRGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNILQAVT
DVIRINGRDVVMATFSTPYNSIPGSAVCAYDMEDVANAFTGRFKEQKSPDSTWTPVPEEK
VPKPRPGCCAGSASLEKYKSSNEFPDDTLNFIKMHPLMDESVSSIANRPWFLKTMVRYRL
TRIAVDTAAGPYQNYTVVFLGSEKGIILKFLAKMSSGFLNDSLFLEELNVYNPEKCSIDG
VEDKRIVGMQLDKKGSSLFVAFSSCVMKVPLSRCEWHGKCKKTCIASRDPYCGWVKEGAC
TEVLPDTKLAFEQDIELGNTDGLGDCQNSFVALNDIPTSPHDNEKSRDTVRHGQSSSPFL
TTSRSPIREGHSDRGRMFDQKDPMVSSDKKNPYMAVPSHNHQDTNGVIRESYQKSHDQLV
PVTLLAVAVILAFVTGAIFSGIIVYCVCDHRRRDVDMVRRKDKDSVHLQRGSMNSVTKLT
GIFETQSMDPKPEAILTPLMHNGKMCTPSGNAKLLIKADQHHLDLTALPTPESTPTLQQK
RKPSRGSREWERNQNLINACAKDLASMASPVIPTDVPLRASPGHIPSVVVLPITQQTYQH
DYVDQPHRVEMTQMSLEDQNATLEYKAIKEHLSSKNLNLVENNTMPPRVPQREASLGPLT
SVPQMGKRLEVHSSVYGHEYKRGYPANSEQKNHQTSTLKRHNTNSSNSSHLSRNHSFNRV
ENPPPAPQRVDSIHMNAVSSQMQAVTVSRQPSMSSYSSLPRSGVKRTPSLKPDVPPKPSL
SPLSANINPNDACT
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atgaggtctgaggcattgctgctatattttacactactacagattgctggggctggtttc
ccagaagactctgagccaatcagtattgcacatggcaactatacgaaacaatatccagct
tttgttggtcacaagccgggaagaaacaacacgcaaaggcataagctggacatccagctg
atcatgataatgaacagaacgctctacattgctgctagggatcatatttatactgttgat
atggatacatcacattcagaagaaatattttttaacaaaaaattgacatggaagtctaga
caagctgacgttgacacttgcagaatgaagggaaaacacaaggatgaatgtcataatttt
atcaaggtgttgctgcaaaaaaacaatgacaccttgtttgtgtgtgggacaaatgccttt
aacccgtcttgcaaaacctacaagatggattccttggatatccatggcgaggagatcagc
ggaatggccaggtgcccctatgatgcaaagcatgcaaatgtggccctgtttgctaatggt
aagctttactccgccacggtaacagatttcctagcaattgatgctgtcatttatcggagt
cttggagatagtccaactttgcggacagtcaaacacgactcaaaatggttgaaagagccg
tactttgtgcaggcagtgaattatggcgactacatctacttcttctttcgggaaatcgct
gtggagtacaacagcatggggaaggtggtgttccccagggttgcccgggtgtgtaagaat
gatcgaggaggctcccagagggtgctggagaaacagtggacctcattcctcaaagcccgc
ctcaactgctctgtccccggggattcacacttctacttcaacatcctccaggcagtgacc
gacgtcatccggataaacgggcgcgatgttgtcatggctacattctcaacaccctataac
agcatccctggctcagcagtctgtgcctatgacatggaagatgttgctaacgcctttact
ggaagattcaaagagcagaagtccccagactccacttggacaccagtccctgaagagaaa
gtacccaaaccaaggcctggttgttgtgccggatcagcatcgctagaaaagtacaaatct
tccaatgaattcccagatgacaccttgaacttcattaaaatgcatcccttaatggatgag
tcggtatcttccattgcaaacagaccatggttcctaaagacaatggtcagatatcggtta
acccggattgctgtagatactgctgctggaccttatcagaattacactgttgttttcctt
ggatccgagaaaggcattattttaaaattcctggccaaaatgagcagcggtttcctaaat
gacagcctattcctggaggagctgaatgtctacaacccagagaaatgcagcattgatggt
gtggaggacaagaggattgttggtatgcagctggacaagaagggcagttctctttttgtg
gctttttcctcctgtgtcatgaaagtaccactctcaagatgtgagtggcatggcaaatgc
aaaaagacttgtattgcatcacgtgacccttactgtggatgggtgaaagaaggagcgtgc
acagaagtcttacctgacaccaaattggcatttgagcaggacattgagctgggcaacaca
gatgggctgggcgactgccaaaattcatttgtggcgctcaatgacattccaaccagtcca
catgataatgaaaagtctcgagacactgtgaggcatggccaatcaagctccccttttctc
accacctcccgttctccaatcagagaaggacacagcgaccgtgggcgcatgtttgatcag
aaagatccaatggtctcctctgataagaaaaacccatacatggcagtcccatcccataat
caccaggatacaaatggagtgatccgggagagctaccagaagagccatgaccaacttgtt
cctgtcaccctgttagcagtagcagtcatccttgcttttgtgacgggagccatcttctct
gggataattgtctactgtgtgtgtgatcaccggagaagggatgtggatatggtacgtcgg
aaggacaaagactctgtccatttacagaggggctccatgaatagtgtgaccaagcttact
gggattttcgagacccagtctatggaccctaaaccagaagccatcctaaccccgctgatg
cataatggcaagatgtgtactcccagtggcaatgccaaattgttgatcaaagccgaccag
catcatctggacctcaccgctctgcccactcctgagtccacacctaccttacaacagaag
agaaaacccagtcgaggcagccgggagtgggagaggaaccagaacctgataaatgcatgt
gcaaaagacctggcctccatggcttccccagtgatcccaactgatgtccctctgcgtgca
tctcctggccacattcccagcgtggtggtcctccctatcacccagcaaacctatcagcac
gattacgtggaccagccacaccgggttgagatgacacagatgtccttggaagaccagaat
gccacactggaatacaaagctatcaaggaacacctgagcagtaaaaacctgaatttagtg
gaaaataataccatgcctccaagagttccccaaagagaggcatcgctaggacctctcact
tctgtacctcagatgggcaagcggttagaagtgcattcttcagtgtatggtcatgaatac
aagaggggctaccctgctaactctgaacagaaaaaccatcaaacttccactctgaaaaga
cacaatactaactcttcaaattcttcacatctttcaagaaaccatagttttaacagggta
gaaaacccaccccctgctccacagagagtggactccatacatatgaatgctgtgtcgtca
cagatgcaggccgtgactgtatccagacagcccagcatgagctcatacagttctctgccg
aggtcgggggtgaaacgcacaccttccttaaagcctgatgtaccacctaaaccctcatta
tcacccctttcagcaaacatcaaccctaacgatgcatgtacataa
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