Polyodon spathula (Mississippi paddlefish): 121302751
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Entry
121302751 CDS
T07273
Symbol
c2cd3
Name
(RefSeq) C2 domain-containing protein 3
KO
K16751
C2 domain-containing protein 3
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pspa03036
]
121302751 (c2cd3)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pspa03037
]
121302751 (c2cd3)
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
121302751 (c2cd3)
Cilium and associated proteins [BR:
pspa03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
121302751 (c2cd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RPGR1_C
Motif
Other DBs
NCBI-GeneID:
121302751
NCBI-ProteinID:
XP_041088846
LinkDB
All DBs
Position
30:4177081..4203298
Genome browser
AA seq
2322 aa
AA seq
DB search
MKNRKIKTSNLGSKKKKAASDVSPSTGLPPLVEGQLRCFLRVTVSKILWTIQRPPAAPRV
RLKWWGELSDGTCFRPRDSCQKEQKGVKTTARFAIRCGPKQFTSYLADMGMLVLDVVTKP
DHLPIGRVQISGISQLSPTHSISGFFTLVSPTSEKLGELQVSLALEPLSETYDSSSSIPT
TDMSIDTAMSALSKGASRDNQLVVPTQPLRLSINSTSGRDSVGSSASNTPRGKDHLYFQE
NNRVPKDTSSSARPEDALESLRPASPHHRLVQFSQETETHVLPANSQASKDLISVLLDRG
SKLRNAMVVSALQSDLDAEPAWKDIHLPLPLPNDTIRKPVSLPCMPSSGKLLENLLEPDP
NLKPTQVKLLPLSEYQDQEYTLDTENRAIQLLLGSVNSSPLQHWDGTGSPPESLSGGSSI
NEESELNDPHYDQSLLENLFYKAPKSDTSLSDFSSEDDEIKSAKGKQKISRGHAGHNPVR
HRQSLRAPDSKNECSFPEGAALTAGKEPHNAEQSRSIDLSVDRLTLLGRIHLARVIIETL
KIPPDSTQTTPSKKAGKGKPPRPVSTRKCTYFVEYHFPVASSREEAGQVSMKTEVVRVAS
SKIIGGVVKFQQRFVFPLHFSGVMIEQWWNMDLEFKIYARKSTQKKPVPIGTAHFPLRKI
IRSELLSLSTELSVFRLDGEKQELGPLKVSFELAADNKDFSTARAQCAGVSKTPSYAVTS
PGHKTVSLPDNESSQQSDTDDASAFLPVKAHSEVRNMKPQTMKELKGENGIQLNPPYSAA
VHNLNRQFSALRAEEEDGVLLHVLLMVPEGKDFSTGTVQPCNLYLNCKLFGTDEATRSSV
IWGQNQPAFNFAQVAPVTMTSGLLERMKNNVMVIEVWKKVPSPGQDKLVGLAKLPLHQFY
MSFRDPKISHLLLQAQYPVVGVDSYMPVIDVFTGSIQGRLRVLLAMGSGEQILSLQRLKS
EEGTSAPSVQRPTHFLDQMPSTPSEINRRLGNSMREHIFEIKVERVKGLTPLQSTVWGEA
DCFIQYSFPTQDTESEKNLDSQALESGVSLRPFRTTTTLCVPDPVFNDSQSHTLVLPADV
PVQRLLLSACSSQGLAGGGGIQFEVWCRYYYPNVRDQVVARGVLPLSKLCAMVTMQRQEH
AGTQTFSLPLIPRTDSAEGHHPHPSGLLDVCVLYKHSVQAAESSRQGAVASRVVSVAVQV
HRASGLQAAARGAAERDRSFQYHADVGVNTSVSMQLSFLPESEKRTTRVVARTFCPEFDH
HTEFSCNLVIQRSSGETCSLAELLQAAEATFTLYHHGAKQASTGRTSEDTVLGTVKVQLA
DLLNKRTGITGWFAVNIPAERDSVEALQNTGGGLEISISFAHHSDRERVVSAAEALGWHA
GVNGEFTQEHDEDGDGVEWQARERTLSISVAAPRLWLPLHCLLLAGRRDLERSTYCYIRY
RLYDREPFCSSLQHPSLEDEDVTTVTFKETRTVEIRSSQPLLWYLREERLEVQVWVAFGK
EKRPRPHDTDRLVGSAYVDLSTLAKKPLQKLCISGVYPLFKRSAPDLSGAAVRVHITLSP
AHLTPVQEQLSPPVESYLEDVSDAEIREAESFAHAKDSYYQSVEIQQQRKTSGDCKGQDS
QVENTFTVSITVERAMHLSLKGSPLIERTGVSPSCCVSYATADAASPVTTAVIENTDSPV
WDHQQQTRLSKEILVDPRQTLVFKVWHKGDVERVIGFASVDLSPLLSGFQSVCGWYNITD
FSGQCQGQIKVSITPLGTVHGLREERLATSENKAKESDVSFQGFPLSYRTTAMYSSFPTH
VTRYPEQIIKSTSENPDFLVSERPSNRHEEHVGNVRRFHQSLQQGDRTLESAQSSEAQSS
RSALFTALRKNLGELDDIQRYFSQKLSTPSFPHVSDPNKSSRLSENGVHIREPQSNSHNT
EATQLLAKSSRLVCEVNNLFSGHHGRTEDLFPEKPQLVPQVSEDNARLQEQVQLERDLTE
ATDVAYLDPVTGAADEEGISSPLCFPTEYQNLSTRTRDEQLIQDCVSSESDLAMDNATEQ
RDNDTSDTCSEDEYEEAVIQPRALNDVTAMTDRTSPWSSILSEPDMASVEELDEVESLGQ
ERLEAQEVLRAEGSPLPGVLHDSHSSMPSGAQSQTRGECVWFGSHVSSRHTETALGGGEG
EAPVQVDRDIEESTAITRLDFSLDSGNPSTAEGLDNRPQDLHRENLCLERRLSISSESFQ
HELDRNDSDEADEETIPVTLPEPEVLPNFFLPTQHLEASMRALRIAPVFPSSSSDTLESG
AANGIPFRRAKRQKPSVPSPSTRREETKRIAKIFAAQFSQNQ
NT seq
6969 nt
NT seq
+upstream
nt +downstream
nt
atgaagaataggaaaattaagaccagcaacttaggcagcaagaaaaagaaagctgccagc
gatgtctccccatctactggtctcccaccattagtagaaggccagctccgctgctttcta
agggtgacagtcagtaaaatcttatggacgatccagagaccaccagcagcaccccgtgtc
agactgaagtggtggggtgagttgtcggatgggacctgtttccgccccagagacagctgt
cagaaggagcagaaaggagttaagacaacggcacgcttcgctattcgctgcggcccgaag
cagttcacctcctaccttgcagatatgggtatgttggtgctagatgtagtgaccaaaccg
gaccatcttcctattggacgggtccaaatcagtgggatatcacagctctctccaacccac
tccatcagtgggtttttcacattagtgtctccaacgtctgagaagcttggagaattacag
gtgtcccttgctctggaacccttgtctgaaacatatgacagtagcagctctattccaacc
actgacatgagcatagacactgcaatgtcagcgctgtcaaagggtgcttctcgtgacaac
caattggtggtgccgactcagccacttcggctttctattaacagcaccagtggaagggat
tctgtgggaagcagtgcatcaaataccccaagaggtaaagaccacttatactttcaagaa
aacaatagagtcccaaaagatacttcttccagtgcaagaccagaagatgctttggagagc
ttgagaccagcgtccccccatcacaggcttgtacagttttctcaagagacagaaactcat
gtcttaccagcaaacagccaagcatccaaggacctcatctcagtgcttttggatcgtggt
agcaaactcaggaatgctatggtggtttctgctctgcagtctgacctggatgctgaacct
gcatggaaggacattcacctgcctctgcctctgccaaatgatactattaggaaaccagta
tctctgccctgtatgccttcttcaggcaagctgcttgagaatctgctagaacctgaccca
aatctcaaacccacgcaagttaagctcttacctttgtcagaataccaagaccaagaatat
acactcgacacagagaacagagcaattcagctgctcctgggcagtgtaaattcttcccca
ttgcaacactgggatggaacaggttcccctcctgagtccttgtctggcggcagcagtatc
aatgaggaaagtgaactgaacgatccacattatgaccagagcctgctggagaacctgttc
tataaggctcctaaatctgataccagcttgagtgatttcagtagtgaagatgatgaaatc
aaatctgcaaagggaaagcagaagatttctagaggtcacgcaggacataatccagtccga
cacagacagtcacttcgggctcctgatagcaaaaatgaatgttcattcccagaaggagcc
gcattgactgctggaaaagaaccacacaatgcagagcaatctaggtctattgacctgagc
gtggacagactgacactgttgggtcggatacacctggccagggttataattgaaactctg
aaaatccccccagacagcacccagacaacgccaagtaaaaaagctggcaaaggaaaacca
ccaagacctgtttcaactagaaaatgcacctattttgtggagtaccacttccctgtggca
tcttcaagagaagaggctggtcaggtgtccatgaaaactgaagttgtaagggtagcctcc
agtaaaattataggaggagttgtgaagtttcagcagcgctttgtgttcccactgcatttc
agtggtgtgatgatagagcaatggtggaacatggaccttgaatttaaaatctatgctaga
aaaagcacacagaagaagcctgttccaattggaacagctcatttcccattacggaaaatc
attcgatctgaactcctgagtctgtctactgagctgtctgtcttcaggctggatggagaa
aaacaagaacttgggcctctaaaggtttcttttgagctggctgcagacaacaaggatttc
tctactgccagggcccaatgtgcaggagtttctaaaaccccttcatacgctgttaccagc
cctggacacaagaccgtatctcttcctgataacgagagtagtcaacagtcggacactgat
gatgccagtgcctttctccctgtcaaagcacacagcgaggtcagaaacatgaaacctcaa
accatgaaggaattgaagggagaaaatgggattcagctgaacccgccttactctgcagca
gtacataatttaaacagacagttcagtgcactgcgtgcagaagaggaggatggagtcttg
ctgcatgttttgttgatggtaccagagggaaaggattttagcacaggaacagtgcagcca
tgcaatttgtatttaaactgcaagctgtttggtacggatgaagcaacaaggtcttctgtc
atttgggggcaaaatcagccagcatttaacttcgcacaagtggcccctgtgacaatgacc
tccggactgcttgagagaatgaagaacaacgtgatggtgatcgaggtgtggaaaaaggtg
ccaagtccaggacaggacaagctggtgggacttgcaaaactcccattgcaccaattctac
atgtcttttagggaccccaagatttctcacctgctgctgcaggctcagtatccagtggtg
ggagtggacagctacatgccggtcattgatgtgtttacaggtagcatccaaggccgcctg
cgggtcctactagctatgggttcaggagaacagattctgtcactgcaacgtttaaaaagt
gaagaagggacttcagctcctagcgttcaaaggccaacacactttctggatcaaatgcca
agtacaccatcggagataaacagaaggcttggaaactcaatgagagaacacatatttgag
atcaaagttgaacgtgtgaaaggactgactccattacagtccactgtctggggagaagca
gactgctttatacagtatagtttcccaacccaggacacagaatctgagaagaacttggac
tcccaggcgctagaaagcggagtgagtttgaggccgttccgcactaccaccactctgtgt
gtcccagaccctgttttcaatgacagtcagagccacactctggtcctaccagctgatgtt
ccagtacagcgcttgctgctcagcgcttgctcaagccaagggttggcaggcggtggaggc
attcagtttgaagtctggtgcaggtattattacccaaatgtcagagaccaggtagtggcc
cgaggtgtccttcccctgtccaagctgtgtgctatggtgaccatgcagcggcaggaacac
gctggcacgcagaccttcagcctccctctgatccccagaacagacagcgcagaggggcac
cacccacatccttcaggtttgcttgatgtgtgtgtgctgtacaagcactcagtgcaggca
gctgaaagctccagacaaggagctgtagcatcgcgtgtcgtgtctgttgcagtccaggtt
cacagagcatcaggcctgcaggctgcagcaagaggtgcagcagagagggaccgctcgttc
caataccacgcagatgtaggtgtgaacacctctgtcagcatgcagctttctttcctccca
gagagtgaaaagagaacgacacgagttgtcgcccgcaccttctgccctgagtttgatcat
cacacagagttttcttgtaatctagtgatccagagatccagtggggagacctgtagcctg
gctgaattgttacaggctgcagaagctacatttactctctaccaccatggtgctaagcaa
gcctctacaggtagaacatcagaggacactgtactgggaaccgtcaaagtacagttggca
gatttgctgaataaaaggacaggaatcacaggctggtttgcagtaaatataccagcagag
cgtgattcggttgaggctttacagaacactggtggtggattggagatctcgatcagcttt
gctcaccattctgacagggagagggttgtaagcgctgcagaagccttgggctggcatgct
ggtgtgaatggagaatttacacaggagcatgatgaggatggagacggagttgaatggcag
gccagggagcggactttgtcgatctctgttgctgcgcctcgattgtggctccctctgcac
tgcctgctgcttgcaggaaggagagatctggagaggtccacctattgttatattaggtac
agactgtacgacagagagcctttttgctcatctctccagcacccgtccttggaggatgaa
gacgtcaccactgtgactttcaaagagaccagaactgtggagataaggagcagccagccc
ctgctttggtacctgagagaggagaggctggaagtacaggtttgggtcgctttcggaaaa
gagaagaggccgagacctcacgatacggatcgactagttggttcggcttatgtagacctt
tccacactggcaaagaagcctctacagaagctatgcatcagtggagtgtacccccttttt
aaacgcagtgcccctgatttgtctggggctgctgtcagagtccacatcacgctctcccca
gctcacctgacacctgttcaagagcagctttcccctcctgtagaaagttaccttgaggat
gttagtgatgctgaaattagggaagccgaaagttttgcacatgccaaggactcttactat
caaagtgtagaaatccagcaacagagaaaaacttcaggagattgcaaaggccaagattca
caagtcgaaaacacattcacagtgagcatcaccgtggaaagagctatgcatcttagcctc
aaaggcagccccctgatagaacgcactggagtaagcccaagctgctgtgtctcttatgcc
actgcagatgcagccagtcctgtgacaacagctgtaattgagaacacagactctcctgtg
tgggaccaccagcagcagacacggctttccaaggagattttagtagatccacgacagaca
ctggtcttcaaagtttggcataaaggagatgttgagcgagtaatcggattcgcttctgtg
gacctctctcccctgctgtcgggttttcagtcggtgtgtgggtggtacaacattacggac
ttcagtgggcaatgccaaggacagatcaaagtgtccatcactcccttagggacggttcat
ggcctccgagaggagagattggcaaccagcgagaacaaagcaaaggagtctgatgtttct
tttcaaggattccctctgtcatataggactactgccatgtacagttcttttccaactcat
gtcaccagatatccagaacaaatcattaagtcaacctcagaaaatcctgactttttggtc
tctgaaagaccctccaatcgacatgaggagcacgtgggcaatgtgcgcagattccaccag
tctttacagcaaggggacagaaccttggaaagtgctcagagcagtgaagcacaatcctct
cgttctgcacttttcacagctcttagaaaaaatctcggtgaactggatgatattcagaga
tatttcagtcagaagctgtccaccccttcgtttccacatgtttctgaccccaataaatcg
tcaagactttctgaaaatggagttcacattcgagaacctcaaagcaactctcacaacact
gaagccacacagcttctggcaaagtcaagcaggctggtctgtgaagtaaacaacctgttt
agcggtcatcatggaagaactgaagatttgtttcctgagaaacctcagcttgtgcctcaa
gtcagcgaagacaacgcaaggctccaggaacaggtccagcttgaaagagatttaactgag
gcaacagatgtagcatatctagatcctgtaactggtgccgcagatgaagagggaatctct
tctcctctctgtttcccaacagaatatcaaaacttaagcactaggactcgcgatgagcaa
ttaattcaggactgtgtcagttctgagagtgatttggccatggacaatgctactgaacaa
cgagataatgataccagtgacacctgctctgaggatgaatatgaagaggctgtaatccaa
ccaagagccctgaacgatgtgactgcaatgactgatagaaccagtccgtggtccagcatc
ttgtcagagcctgatatggcttctgtggaggagctggatgaagtggaatcactggggcag
gaaaggttagaagcacaggaagtcttgagagctgagggcagtccattaccaggtgtcttg
catgacagccattccagcatgcctagtggtgcacagtcgcagactaggggggaatgcgtt
tggtttggcagccatgtctcaagcaggcacacagagacagctttgggaggaggtgaaggg
gaagctccggttcaggtggatagggatattgaagaatccacagccattaccaggttagat
ttctcactggattcaggaaacccaagcacagcggaaggacttgataacagaccgcaagat
ctacacagagagaatctctgtcttgaaagaagattgtctatctcttctgaatcatttcag
catgagttggacaggaatgattcagatgaagctgatgaggagaccattccagtcacatta
cctgagcctgaggttctcccaaattttttcttaccaactcaacatctggaagcatccatg
agagccctccgcatagcccctgtgttcccctcgtccagctcagatactctggaaagtggt
gctgccaatggaattccttttagaagagcaaagcgccaaaagcccagtgttccatcaccc
tcgaccaggagagaagaaacaaaaagaattgcaaagatctttgcagctcagttttcacag
aatcagtaa
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integrated database retrieval system
