Polyodon spathula (Mississippi paddlefish): 121302787
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Entry
121302787 CDS
T07273
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM36-like isoform X1
KO
K12013
tripartite motif-containing protein 36 [EC:
2.3.2.27
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121302787
04121 Ubiquitin system [BR:
pspa04121
]
121302787
Enzymes [BR:
pspa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121302787
Membrane trafficking [BR:
pspa04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
121302787
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
121302787
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
COS
ANCHR-like_BBOX
SPRY
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
fn3
zf-C3HC4_3
zf-RING_5
Nnf1
Ig_DSCAM-DSCAML_C
Apyrase
Motif
Other DBs
NCBI-GeneID:
121302787
NCBI-ProteinID:
XP_041088934
LinkDB
All DBs
Position
2:85854005..85891309
Genome browser
AA seq
757 aa
AA seq
DB search
MSESDEMSELGSIIERITKDGDPIKNIERELICPGCKELFTHPLILPCQHSVCHKCVKEA
LLLTHEDSFTDAGSECSNSGSPRSRLSSSSIDRLDRLSRSASLRRSFGRRGRIGFHLFSS
YRSSTPTGKKRNSLIPRVTNFPCPGCQHDIDLGERGISGLFRNFTLENIVERYRQAARAA
VAIMCNLCKPPPVEATKSCMDCKASYCNECFKTHHPWGTPKAQHEYVGPTTNFRPKVLMC
PEHEMEKVNMYCEVCKRPVCHLCKLGGSHANHKVTSMSSAYKLLKEKLSRSIHYIISKED
QVKTQISELDELITHTQHNGETSTREANLHFETLFNILEERKTEMLRTIEVTQATRLEKL
KSQREEYQGMLENSGLVGYAQEVLKETDQSCFVQTAKQLYTRIQKATETLRSFHPAADPS
FGDFILDVSKEEDLLKEMGFSIPDVPVIDQSLSRVYNEGLICWLLPEDSSPTDHYILEYK
KLDDKAETTWLATEKIYGNSKVVCDLDTNSLYSFRVKSCKKSVYSSYSQEVAFHTPPAPV
FSFLFDDKCGFNTERLILNRRQSVESVAGLSLLLGSERIQMGSYMCLDYIIGDTGINRGS
HFWVFRVEPHSYLVKVGVASDTKLQEWFHNPRDTSSPRYDHDSGHDSGSEDTNYDSSQPF
TLVTIGMGKFIIPKGSAATATDYSNRVLPVPQRIGICLDYEKGRVYFYDADNMKCLWERQ
VDCTGTMYPAFGLMGSGGVHLEEVILSKRLGYTGDAQ
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagtcagatgaaatgagtgagcttgggtctattattgaaaggataacaaaagac
ggggatcccattaagaacattgagagggagctgatctgtccaggctgtaaggagctcttc
acgcatcctttgattttgccctgtcagcacagtgtctgtcacaagtgtgtcaaagaggcg
ctccttctgacccatgaggactcctttacagatgctggctcagagtgctccaattcgggc
agccctcgctcgcgcctttcatcttccagcattgacagacttgaccgtcttagcagatca
gcctcactgagaaggtcatttggaaggagaggtagaattgggttccatttatttagtagc
tatagatcaagtacccctactggaaagaagcgcaactccctgattccccgggttaccaac
ttcccctgcccaggatgccagcatgatattgatctaggggagcgtgggatcagcggactg
ttccgaaacttcactttggagaacattgtggagaggtacaggcaagcagctagggcagct
gtggcgatcatgtgcaacctttgcaagcctcctcctgtcgaagccaccaaaagctgtatg
gactgcaaggccagctactgcaacgagtgtttcaagacgcaccatccctgggggacccca
aaagcccagcatgagtatgtgggaccaaccaccaactttagaccaaaggtgttgatgtgc
ccggaacatgaaatggagaaagtcaacatgtactgtgaagtttgcaagaggcccgtttgc
cacctttgcaaacttggtggttctcatgccaaccataaagtgacatctatgagcagcgcc
tacaaactactaaaggaaaaactatccaggagtatccattacatcatcagtaaggaggac
caagtgaagactcagatctctgagctggatgaattgattactcatacccagcataatgga
gaaacatctacaagggaagccaatcttcattttgaaacgctcttcaacattctggaggag
aggaagactgagatgctcaggaccattgaggtaacccaggccacccgtctggagaagctg
aagagccagagggaggagtaccaaggcatgctggagaacagcgggctggtgggctacgcc
caggaggtgctaaaagagaccgatcagtcctgcttcgtccagactgcaaagcagctgtac
accagaatccagaaagccacagagactctaaggtcattccacccagctgccgatccttcc
tttggtgatttcatccttgatgtttccaaggaagaagatcttctaaaggagatgggcttc
agcattccagatgtaccagttattgaccaatccctgagccgtgtctacaacgaaggtctg
atctgctggctgctacctgaagattcctctcctactgaccattacatcctggagtacaag
aagctggatgacaaagcagaaaccacatggctggccactgagaaaatatatggcaacagc
aaagtggtttgcgatcttgacactaacagcttatacagcttcagggtgaaaagctgcaag
aagtctgtctacagttcgtacagtcaagaggtggctttccacacacccccggcaccagtt
ttcagttttctctttgatgataagtgtggcttcaacacggagcgcctcatcttgaacaga
cggcagtctgtggagagcgtggctggcctctccctgctgttgggctcagagagaatccag
atggggagttacatgtgtctggattacattatcggggacaccggcatcaacagagggagt
cacttctgggttttccgtgtggagccccactcttacttggttaaagtaggcgttgcttca
gatactaagttacaggagtggttccacaaccctagagacaccagcagtcccaggtatgat
catgacagtggtcatgacagcggcagtgaagataccaactatgacagctcccagcctttc
actctggtcaccataggaatgggcaagttcatcatccccaagggctcggctgccaccgcc
accgactatagcaaccgtgtcctgcctgtgccacaacgtattggtatctgtcttgactac
gagaaagggagggtttacttttatgatgcagacaacatgaaatgcctttgggagcgtcag
gtggattgcactggcactatgtatccagcttttggccttatgggtagtggaggagtacat
cttgaggaagtcatcttaagcaagcgtttaggatatacaggagatgctcagtag
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