Polyodon spathula (Mississippi paddlefish): 121302883
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Entry
121302883 CDS
T07273
Symbol
trpc2a
Name
(RefSeq) short transient receptor potential channel 2
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pspa04040
]
121302883 (trpc2a)
Ion channels [BR:
pspa04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
121302883 (trpc2a)
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
PKD_channel
Ank
Motif
Other DBs
NCBI-GeneID:
121302883
NCBI-ProteinID:
XP_041089117
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Position
30:complement(8175193..8197561)
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AA seq
882 aa
AA seq
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MENLTQAQWREIMNKKMRFPPTLIAAIQAANVLQVSRLLAVSDGILRQLDESEDRLWRES
LNLAIRLGNEDIIVVLLDCVKFDFRQIHEALLVAVDTNQPTVVKRLLDRLDLEKGVGNNK
VDIRSFSLAIFDHSIDNSHFAPGVTPLTLACQKDLYEIVEMLTKKGHVIPRPHKVSCTCL
ECRNGRQYDLLKFSLSRINTFRGIASRSYLSIGSEDAMLSAFRLSRELKRLSKKEPEFKP
QYLSLEDLCQEFAVELLGMCRNQSEVTTILNDCGDDSEEEMDQQNFEEGIPNLARLRLAV
NHNQKRFVAHPICQQVLSSIWCGNLSGWRGSKTVWKLFVSIGIFITMPVLCLIYWLAPKS
RIGKILKIPVIKFLLHSASYLWFLIFLLAESIIMESNRKHFSSRNQSILQNSFHMVWVVG
FFWHECKEVWIEGLRNYLLDWWNFLDIMTLSMYLASFSLRVLVALKGYFYCLESETTLEC
IYFTQTEREGWRQEDPQIIAEVLFAVTSMLSFTRMAYILPAHESLGTMQICIGKMIDDMM
RFMFILMIIGTAFLCGINNIYVNYVVSPRLGQFNETFPFLFWTMFGSADQSAVDMPDYVV
AEFVGRVMYGIFTLVIVIVLLNMLIAMITNSFQKIEDDADVEWKFARSKLYLCYFREGLT
LPVPFNIIPTPKSLFYLLRGIFRKICCCCKTKRLPDYPPIPSISNTALQGKDFPMESRVS
YRLQVIKALVQRYIKTACREFEESKRKDIGNRITELNKVVGRLHSEMKQIRKKLTQGASI
SGEEEGSSILGKYILGAKTNFRTFDQDSLASEGSVKVTVHQRERGEEGEGEGEGKGEGQC
VEEEGCEKQVTSPTDSKSSEDTDTGFGSQTGEDLTEGGEDVN
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atggagaaccttacgcaagcgcaatggcgggaaattatgaacaagaagatgcgtttcccg
ccgactctgattgcggcaatccaggcagcgaacgtgttgcaggtgtccaggctgctggcg
gtgagcgacgggatcctgcggcagctggacgaatcggaggaccgcttgtggagggagtcc
ttgaatctagccatccggctgggcaacgaggacataatagttgtcctcctggattgtgtc
aagttcgatttccgtcagatccatgaggccttgctggtggccgtggacaccaaccagccc
actgtggtcaagcgtctcctggacaggctggaccttgagaaaggggttggcaacaacaag
gtggacatccgttccttctccctggccatctttgatcactccatcgacaactcgcatttt
gcccccggggtcaccccgctcacactggcctgccagaaagacctgtacgagattgtagaa
atgctgaccaagaagggtcacgtcatcccccggccccacaaggtctcctgcacctgcctg
gagtgccgcaacgggcgccagtatgacctgctgaagttctccctctcccgcatcaacacc
ttccggggcatcgccagccgctcctacctttccatcggcagcgaggacgccatgctcagc
gccttccgcctcagccgtgagctcaagaggctctccaagaaggagcccgagttcaagcct
cagtacttgagcttggaggacctgtgccaggagtttgcggtggagctgctgggaatgtgc
aggaaccagagtgaagtgacgacgattctgaacgactgcggagacgacagcgaagaggaa
atggaccagcagaacttcgaagaggggatccccaacttggctcggctgagactcgctgtc
aatcacaaccagaaacggtttgtggcccaccccatctgtcagcaggtgctctcatcgatt
tggtgcggcaatctgtctggctggcggggcagcaagacagtgtggaagctcttcgtctcg
attgggatcttcatcaccatgcctgtgctctgtctcatctactggctagctcccaaatcc
aggatcggaaagatcctgaagatcccggtgataaagttcctgctacactctgcctcctat
ctgtggttcctgatctttttgcttgcggagtccatcatcatggagagtaaccggaaacac
ttctcctcacgcaaccagagcatccttcagaactccttccacatggtgtgggtggtgggc
ttcttctggcatgagtgtaaggaggtgtggattgagggtctgcgtaactatctgctggac
tggtggaacttcctggacatcatgaccctcagcatgtacctcgcctccttcagtctgcgc
gtgctcgtcgccctcaagggctacttctactgtctggagtcagaaaccacactggagtgc
atctacttcacacaaactgagcgagaggggtggcgtcaggaggatccccagatcattgca
gaggtactctttgctgtgacgagcatgctcagtttcacgcggatggcgtacatcctaccc
gcccacgagtctctgggaacaatgcagatctgcatcgggaagatgattgacgacatgatg
aggttcatgttcatcctgatgatcatcggaacagctttcctctgcggaatcaacaatata
tatgtgaactatgttgtatccccacgcctaggacagttcaacgagacgttcccgttcctg
ttctggaccatgttcgggtcggcggaccaaagcgcagtggacatgcctgactatgtggtg
gctgagtttgtggggcgggtgatgtacgggatattcaccctggtgatcgtcatcgtattg
ctcaacatgctcatcgccatgatcacaaactccttccagaagatagaggacgacgcggat
gtggagtggaagtttgcacgctcgaagctctatctctgctacttcagggagggcctcacc
ctgccggtccccttcaacatcatccccaccccaaagtccttgttctacttgctaaggggc
attttccggaagatctgctgttgttgtaaaaccaagcgattgcctgactacccacctatt
ccctcaatttcaaacacagcacttcagggcaaggatttccccatggagagccgtgtgtct
tacaggctgcaggtcatcaaggcgctagtgcagcgatacatcaagacagcctgcagggag
ttcgaggagagcaagaggaaagatattggcaatcggattacagagctgaacaaagtggtc
gggcgactccactccgaaatgaagcaaatccgcaagaaactcacccagggcgcttccatc
tccggagaggaagagggttctagcatactgggcaagtacatccttggggccaagaccaac
ttccggaccttcgaccaagactccctggcatctgaagggtctgtaaaagtcactgtgcac
cagagagagagaggggaggagggtgagggcgagggcgaaggcaagggggaaggccagtgt
gtggaagaggaagggtgtgagaagcaggtaacctcccccactgacagcaagtcctctgaa
gacacggatacagggtttggatcgcagacgggagaagacttgactgagggaggcgaggac
gtgaattag
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