Polyodon spathula (Mississippi paddlefish): 121302909
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Entry
121302909 CDS
T07273
Symbol
sytl2a
Name
(RefSeq) rabphilin-1 isoform X1
KO
K17598
synaptotagmin-like protein
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pspa01009
]
121302909 (sytl2a)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121302909 (sytl2a)
Protein phosphatases and associated proteins [BR:
pspa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121302909 (sytl2a)
Membrane trafficking [BR:
pspa04131
]
Exocytosis
Calcium ion-dependent exocytosis
Synaptotagmins
121302909 (sytl2a)
Small GTPases and associated proteins
Rab associated proteins
121302909 (sytl2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
Motif
Other DBs
NCBI-GeneID:
121302909
NCBI-ProteinID:
XP_041089176
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Position
30:3541283..3579880
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AA seq
1270 aa
AA seq
DB search
MVQSIVDTNMAGQLREEPSSSKTLEGNVEEQSSFQVKTTKDDYTRSTPVVEEHIIPEVKK
RDAQSLYNMVQSLTNTEMADQPWEIPSSGKIVEGNMEDQSSLKVNASKEDFIRNTPVVEE
HIIPEIKSNDASSLYNMIQSMVDIERSNQPTEEPSVDEGDQYEAFSFEEYDVEEEPEPDG
TYEIAHTAHEEKNVFDIPDTVLRELDIEKEKSPREVNEKESAKKIANLRTFWEKENSAPK
ITTVKKLDSPQEEQINRSSFQEFVEHENSALKNNANPSTAQQDFTFQPHAHKNRDEIGNY
EGSRVKDAEESSTPSLQWRTSFDIPASSEDQTEIVHASKFYCDNSDIEDEDTITPVEEGR
NSISLENKPLTEVECIENSTITPKSIHLGGEVYTVQSSDEDKSKDNHNSVYLSKYTTHVK
QSSPVPLVQNVSSKEDSQMGKIRNLKSFWEKEKSEPKTIAVKQKVAKETDESRSKELGKR
FATLELGLSMKESEPDHGFDRYGASSVSSQKPHFTVQTMKDRMQGEHKDRITSSSQFQNL
KDFWSKGPEDLGRPTLITMAPSNTDNTSGDLESTSPTSHGPKIQETVNLLRQQQLSPTEE
KKILNPRFYPKVLPTEAAEIQVKSFRGEQCQIPRDLSEPKKEQLVEYVEKSTCPSSIDHD
ALNMSLQGSLSEISKSTLPCPQDLSVDTNSEKKKSEIASMHSTELSLGDEGMSYTEEPYS
RRISERSDDAYHSKEGKDRAQDESSVYLPEELEPKLNVVPSVLRSSTPVKSEDSPSQSRA
GVLQAAASFKHRESEDDEGSSRGTASDNTWSYTGFDEENNPVMMALRRSASKPMSSSKSL
EDIMSASSNERSLNNARGELVLSAEDDQHSKVQQIPKEIMSGFSTVPSHPVSLSLDSKKM
KEMSMSVPAFLQQESDGTDSTSESSFHIGRHKKTASSLTNLSNSSGMASMSSVSSSVMSI
YSGDFGNVDVKGNIQFTIDYVSQLKEFHIFVVQCKDLAEADVKKHHSHPYVKSYLLPDKA
KMGKRKTAVKKKTLNPTYNEILRYKIDKETLMTQTLNLSVWHNDTFGRNSFLGEVDVDLS
TWNWDNKQMNWFPLKPRAPSGSQNLEHRGEMRIALRFIPQVSQSKKKPNTGEVHIWVKDC
KGLPALRASGVDPFVKCSVLPDTSRKSRQKTRVLKKTSNPLFNHTMVYDGFRPEDLKEAC
VELTVWDHDRLVNHFLGGLRLGLGTGKSYGTAVDWMDSIADEAMLWERMMDFPNEWVEDV
LPLRMLMMAK
NT seq
3813 nt
NT seq
+upstream
nt +downstream
nt
atggtccagtccattgtggacacaaacatggcaggtcaactgagggaggagccatcgtcc
agtaaaacacttgaaggaaatgtggaggaacagtcttctttccaagtaaaaaccactaaa
gatgattacacaagaagcacaccagtggtagaagaacatattattcctgaggtgaagaaa
cgcgatgcacaatcactgtataacatggtccagtccctgaccaatacagagatggcagat
caaccatgggagataccgtcttctgggaaaatagttgaaggaaacatggaggaccaatct
tctttgaaagtgaatgccagtaaagaagatttcataagaaacacaccagtggtagaagaa
catataattcctgagataaagtcaaatgatgcatcatcactatataacatgatccaatct
atggttgacatagagagatctaatcaaccaacagaagagccatcagtggatgaaggtgat
caatatgaagcattctcatttgaagaatatgatgtagaagaagaacctgaacctgatggc
acgtatgaaattgcacacactgcccatgaggagaaaaatgtgtttgatattccggacact
gttttgagggaattagacattgaaaaagaaaaatccccaagagaagttaatgaaaaagaa
tcagcaaaaaaaatagccaacttaagaacattctgggaaaaagagaacagtgcacctaaa
ataacaacagtgaagaagttagattccccacaggaggaacaaataaacaggagcagtttt
caggaatttgttgagcatgaaaacagcgcgttgaaaaataatgcaaaccctagtacagca
caacaggatttcacttttcagcctcatgcacataaaaatagggatgaaataggaaattat
gaaggaagcagggttaaggatgctgaagaatcttctactccctccctacaatggagaact
tcatttgatataccagcctccagtgaggatcagactgaaatcgtacatgcatctaaattc
tactgtgacaactctgatatcgaagatgaagacaccattactccagtcgaggaaggcagg
aactccatttcactagaaaataagccactgacagaagttgaatgcatagagaatagcaca
atcacccctaaatccattcatttaggtggggaagtgtacactgtgcagtccagtgacgaa
gataaaagcaaggataatcacaattcagtgtatttgtcaaaatatactacacatgtgaaa
caaagcagtccagtaccgcttgtgcaaaacgtctcaagcaaagaagacagccagatgggc
aaaataaggaacctgaagtccttctgggagaaggagaaaagcgaacccaaaaccattgct
gtcaaacagaaggttgccaaggaaactgatgaatctagaagcaaagagttaggtaaaaga
tttgccaccttggagttaggtctcagcatgaaagagagtgaacctgaccatggttttgac
agatacggggcatcctcggtttccagtcaaaagccccatttcacagttcagacaatgaag
gatagaatgcaaggtgaacataaggatcgcattactagctcatcacaatttcagaacctc
aaggacttctggagtaaaggacctgaagacctaggcaggccaactcttataacgatggct
ccctctaacactgacaatacatctggtgatctagaaagcacaagtcccactagccatggg
ccaaagattcaagaaacagttaacctgttgcgacaacagcagctgtcccctacagaggaa
aagaagatattaaatccccgtttttaccccaaagttctgcccacagaagctgcagagatt
caggtcaaatcctttcgaggggaacaatgccagattcccagagatctttctgaacctaag
aaagaacagttggtggaatatgtggagaaatcaacatgtccttccagcatagatcatgat
gccctaaacatgagtttgcaaggatcactttcagagatctccaagagtacactgccttgt
cctcaagatctatctgtggataccaattctgagaaaaagaaaagtgagatagcatcaatg
catagtacagagctgagcttgggggatgaaggcatgtcctatactgaagagccgtattcc
aggagaatctctgagcgaagtgacgatgcttatcattccaaagaagggaaggacagggca
caagatgaaagcagtgtttacctcccagaggagctcgagcccaagctgaatgtggttcca
agtgttttaagatctagcacgcctgtaaaaagcgaggacagtccaagccaatcaagagcg
ggtgtactgcaggctgcggcttctttcaaacacagagagagcgaagacgacgaaggctca
tcccggggcacagcgtctgacaacacctggtcttataccggttttgatgaagagaataac
cccgttatgatggccctgagaagaagtgcgtcaaagcccatgtcttcttccaaaagtcta
gaggacattatgtcagcctcgtcaaacgaaagaagtctaaacaatgccagaggagaatta
gtacttagtgcagaagatgatcagcattccaaggttcaacaaatcccaaaagaaatcatg
tcaggattttccacagtgccttcccacccagtctcgctgtccttggattcaaagaagatg
aaggaaatgagcatgtcggtgcctgctttcctgcagcaagagagcgatgggactgactca
acctcagaaagcagtttccacattggcagacacaagaagaccgccagctctctaacaaat
cttagcaactcctctggcatggcatcaatgtcctctgtcagcagtagtgtcatgagtatc
tacagtggagatttcggaaacgtggacgtcaaagggaacatacagttcaccatcgattat
gtgagccagttgaaggagttccatatctttgtggtccagtgcaaagacctggcagaggca
gatgtaaagaaacaccactctcacccgtatgttaaaagttacctgctccccgataaagct
aaaatgggcaaaaggaagacagcagtgaaaaagaagactttgaacccaacctacaatgag
atactgaggtacaaaattgacaaggagaccctcatgacccaaacactcaacttgtctgtt
tggcacaatgacacttttggacgcaacagcttcctgggtgaggtggatgtggacttgtcg
acatggaactgggacaacaagcagatgaactggttcccacttaaaccaagggctccctca
ggcagccaaaacctggagcacagaggggagatgagaatagccctccgcttcatcccacag
gtctcccaaagtaaaaagaagcccaacacaggggaggtacacatctgggtgaaggactgc
aagggcttgccagcgctgagggcaagtggcgtcgacccctttgtaaaatgttcggtgctc
ccagacaccagcaggaagagccgtcagaagacaagggttctgaagaagacgtcgaacccc
cttttcaatcataccatggtgtatgatgggttccggcctgaggacctcaaagaggcctgt
gttgagttgacagtgtgggaccacgacaggctggtcaatcatttcctgggaggactgagg
cttggccttggaacaggtaaaagttatgggacggcagtagattggatggactcgattgcg
gatgaagcaatgctgtgggagcgaatgatggactttcccaatgaatgggtggaagatgtg
ctgcctctgagaatgttaatgatggcaaaataa
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