Polyodon spathula (Mississippi paddlefish): 121302985
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Entry
121302985 CDS
T07273
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03015
mRNA surveillance pathway
pspa04261
Adrenergic signaling in cardiomyocytes
pspa04382
Cornified envelope formation
pspa04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121302985
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
121302985
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
121302985
09158 Development and regeneration
04382 Cornified envelope formation
121302985
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pspa01009
]
121302985
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pspa03019
]
121302985
03036 Chromosome and associated proteins [BR:
pspa03036
]
121302985
Protein phosphatases and associated proteins [BR:
pspa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
121302985
Messenger RNA biogenesis [BR:
pspa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
121302985
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
121302985
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
121302985
NCBI-ProteinID:
XP_041089298
LinkDB
All DBs
Position
31:8297708..8307532
Genome browser
AA seq
451 aa
AA seq
DB search
MAGAGGGGNDVQWCFSQVKGAIDDDVAEADIISTVEFNHSGELLATGDKGGRVVIFQQEP
EVRNNKSQLQCRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTND
KTIKLWKISERDKRPEGYNLKEEDGRYRDPSTVTTLRVPVFRPMDLMVEASPRRVFANAH
TYHINSISVNSDYETYLSADDLRVNLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHP
NQCNTFVYSSSKGTIRLCDMRESALCDKHSKLFEEPEDPSNRSFFSEIISSISDVKFSHN
GRYMMTRDYLSVKIWDLNMESRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSV
VMTGSYNNFFRMFDRGQKKDVTLEASRESSKPRAVLKPRKVCAGGKRKKDEISVDSLDFN
KKILHTAWHPQENIIAVATTNNLYIFQDKLN
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagccggaggcgggggcaatgatgtgcagtggtgcttctctcaggtgaagggg
gccatcgacgatgacgttgctgaagctgatattatttcgactgtggagttcaatcactct
ggagagctgctggcgacgggcgacaagggaggcagagtcgtcatcttccagcaggagcca
gaggtcagaaacaataagagccagctgcagtgccgaggcgagtacaacgtttacagcacc
ttccagagtcacgagccggagttcgactacctgaagagcttggagattgaggagaagatc
aacaagatccgctggctgccccagaagaatgcagcgcagttcctgttgtccacaaacgat
aaaactataaagctgtggaagatcagtgaacgagacaagagaccagaggggtacaacctg
aaagaggaggatgggaggtacagggacccctccacagtcacaacactacgggtgccggtg
ttccggcccatggacctcatggtggaggcgagtccacgcagggtgtttgcgaacgcacac
acctaccacatcaactccatctcggtcaacagcgactacgagacctacctgtctgcggac
gacctgcgcgtcaacctgtggcacctggagatcaccgaccgaagcttcaatattgtcgat
atcaagccggccaacatggaggagctgacggaggtgatcacggccgcagagtttcacccc
aaccagtgcaacaccttcgtctacagcagcagcaagggcaccatcaggctctgcgacatg
agagagtctgcactgtgcgacaagcactccaaactgttcgaggagccggaggatcccagc
aacaggtcgttcttctccgaaatcatctcctccatttcggacgtcaagttcagccacaac
gggcgctacatgatgaccagggactacctgtccgtcaagatctgggacctaaacatggag
tcgagaccggtggagacgtaccaggttcatgagtatctcaggagtaagctgtgttctctc
tacgagaacgactgtattttcgacaagtttgagtgctgctggaacgggagtgacagcgtg
gtgatgactggctcctacaacaacttcttccggatgttcgaccgcgggcagaagaaggac
gtgaccctggaggcgtcgcgggagagcagcaagccgcgcgccgtgctgaagccgcgcaag
gtgtgtgctgggggcaagaggaagaaggacgagatcagcgtggacagcctggactttaac
aagaagatcctgcacaccgcttggcacccccaggagaatatcatcgcggtggccaccacc
aacaacctgtacatattccaggacaaactgaactga
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