Polyodon spathula (Mississippi paddlefish): 121302989
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Entry
121302989 CDS
T07273
Symbol
vsig8b
Name
(RefSeq) V-set and immunoglobulin domain-containing protein 8b isoform X1
KO
K06788
coxsackievirus and adenovirus receptor
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03267
Virion - Adenovirus
pspa04514
Cell adhesion molecule (CAM) interaction
pspa04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03267 Virion - Adenovirus
121302989 (vsig8b)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
121302989 (vsig8b)
04517 IgSF CAM signaling
121302989 (vsig8b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pspa04515
]
121302989 (vsig8b)
Cell adhesion molecules [BR:
pspa04515
]
Immunoglobulin superfamily
CTX family
121302989 (vsig8b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-set
Ig_3
I-set
ig
Ig_2
Ig_C17orf99
TM_ErbB1
Sp38
Tweety
TMEM154
Motif
Other DBs
NCBI-GeneID:
121302989
NCBI-ProteinID:
XP_041089305
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All DBs
Position
31:complement(2952297..3016086)
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AA seq
372 aa
AA seq
DB search
MDVLCWRKPGVCSRKLLMVLSAMYLSTDITVAMKVTSIGPQTVRKARGGTVVLGCTFIAD
VTDRGELDIEWSNMNPDTTQKDEQILGFSGGEVFHYGSQDLSKRLNFTDKNPALGDASIS
ITDLELGDTSTYQCKVKKMPGIDTRKVTLVVEVPPSVPRCSVEGGQDEGHSVSLSCKSDE
GMIPLTYKWGRESGEGLPPTAIQNPGTGILLIQNHTKSFSGSYRCTVRNAVGEEQCVLSL
GISPSVNKAGMIAGAVIGSLLLLLLLLLLIWLLICCCNKRRYQKEVANEIREDVAPPVSR
SVTPNASVHSSFRSILGYRSHPIIGYHYQRANHRDIYKGQLMDSNKPSNNNLTKPGGVPV
MTSVQNREAYAV
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggacgtgttgtgttggaggaagcctggtgtgtgctctagaaagttattgatggtgctc
tctgcaatgtacctgagcacagatatcactgtggcaatgaaggtgacctctattgggcca
cagacagtccgcaaagcccggggtgggacagtagttctgggatgtactttcatcgctgat
gtcacagataggggagagctggacattgagtggtcgaacatgaacccagatacaacgcag
aaagatgagcagatcctggggttttctgggggtgaggtgtttcattacggcagccaagat
ctcagcaaacgtttgaacttcacagataagaacccagcattgggtgatgcctctatttcc
ataacagacctggaacttggagacacatcaacctaccagtgcaaagtgaagaaaatgccg
ggcattgatacacgcaaggttacattggtggtggaggtgccaccctcagtgcccaggtgc
tcagtggaggggggtcaggacgaggggcactcagtatctctcagctgcaaatctgatgag
ggcatgatccccctcacctacaaatgggggagggagagcggagaaggactaccgcccaca
gccatacagaatcctggaacaggcatactcctgatccagaatcataccaagagtttctca
ggatcgtatcgatgcacagtgagaaacgctgttggagaggagcagtgtgtgttgtcgctt
ggcataagcccatctgtgaataaagccggaatgatagcgggtgctgtgattggttctctg
cttttgttgctcctcctcctgctcctcatctggcttcttatttgctgttgcaacaagcgg
cgatatcagaaggaagtggccaatgagatcagggaggatgtggcccctccagtcagtcgc
tcagtcacgcccaatgccagtgtccactccagcttccgctccatcctgggctaccgctca
catcccatcattggctaccattaccaacgagccaaccacagagacatctacaaagggcag
cttatggacagcaacaaaccatctaataacaacctgacaaaacctgggggggttcctgtt
atgacatccgttcaaaacagagaagcatatgctgtctaa
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