Polyodon spathula (Mississippi paddlefish): 121302990
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Entry
121302990 CDS
T07273
Name
(RefSeq) transcription factor COE2-like
KO
K09103
early B-cell factor
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121302990
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
121302990
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GFIT
Motif
Pfam:
COE1_DBD
COE1_HLH
TIG
Motif
Other DBs
NCBI-GeneID:
121302990
NCBI-ProteinID:
XP_041089310
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Position
31:complement(8216092..8247998)
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AA seq
581 aa
AA seq
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MFGIQNHLSREGSDIKEKTSGVEMDSIRSWVRNVGVVDANVASQSGVALSRAHFEKQPPS
NLRKSNFFHFVLALYDRQGQPIEIERTSFFDFVEHDKEQSGQKTNNGTHYKLQLLYSNGV
RTEQDLYVRLIDSASKQPISYEGQNKNPEMCRVLLTHEVMCSRCCEKKSCGNRNETPSDP
VIIDRFFLKFFLKCNQNCLKTAGNPRDMRRFQVVLSTTVSVDGHVLAVSDNMFVHNNSKH
GRRARRLDPSDATEPGMEYATPCIKAVSPSEGWTTGGAMVIVIGEHFFDGLQVVFGTMLV
WSEFITPHAIRIQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFIYTALNEPTIDYGFQRLQ
KVIPRHPGDPDRLAKEMLLKRAADLVEALYGNAQSNQDMLLKRAADIAEALYSIPRPHSQ
LQALPSSPAHGSVMGLNTYSSQLGVSIGDPGQNGQGGYIRNTSSLSPRGYPSASTPQQGG
YGSAGGMNGYGAVPISSLGVPGSPGFTSASPTASPYGIMPSSPTVPGSGGASILPFSSFP
SVKQKSAFAPVIRPQGSPSPACPSAGGNGFRAMTGLVIPPM
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgtttggaatccagaatcatttatccagagagggatcggatattaaagagaagacctcc
ggagttgagatggattccatccgatcctgggtgcgcaatgtcggtgttgtggatgctaat
gtagcgtcacaaagtggtgtggctctgtcccgggctcactttgagaagcagcccccctcc
aatctccgcaaatccaacttcttccacttcgtactggcgctgtacgaccgacaaggacag
ccaatcgaaatcgagaggacctccttcttcgactttgtagaacacgacaaggagcaaagt
ggtcagaagacaaataatggaacacactacaaactccagcttctgtacagcaatggggtg
cggacggagcaggatttgtacgtcaggctcattgactctgcatccaaacagcccatctcg
tatgaagggcagaacaagaaccccgagatgtgccgcgtgctgctgactcatgaagtcatg
tgcagtcgatgttgtgagaagaagagctgtgggaatcgtaacgagaccccctcagaccct
gtgatcatcgacagatttttcttgaagttcttcctcaagtgcaaccagaactgtctgaag
acagcagggaacccacgagacatgagacgtttccaggtggtcctctccacgacggtcagt
gtggacggtcatgtcctggcggtgtccgacaacatgttcgtccacaacaactcgaagcac
ggacgccgcgcccggaggcttgacccctcggacgcgacagagcctggcatggagtacgcc
acgccctgtatcaaagccgtcagtcctagcgagggctggacaacagggggcgccatggtc
atcgtcattggagagcacttcttcgatgggctgcaggtggtctttgggaccatgctggtc
tggagtgagttcatcacgccccatgccatccgcattcagacccctcctcggcacatcccc
ggagtggtggaggtgaccctgtcttacaagtccaagcagttctgcaagggggctccaggc
cgtttcatatacacggccctcaatgaacccaccatcgactacggcttccagcgtctccag
aaggtcattcccagacacccaggagacccagacagactggccaaggagatgcttctcaag
agagctgctgatctggtggaggctctgtatggaaacgcacagagtaatcaggacatgctg
ttgaagcgtgcagcagatatcgcggaggccctgtacagcatccctcgccctcacagtcag
ctccaggccctgcccagctccccggctcacggcagtgtcatggggctcaacacctacagc
agccagctgggggtcagcatcggagatcccgggcagaacgggcaaggaggttacatccgg
aacaccagcagcctgtctccgcgtggctacccctctgcctccacgccccagcagggtggc
tacggcagcgcgggcgggatgaatggctatggcgcggtgcccatatcctcgctgggagtg
ccaggctcgccaggcttcaccagcgcctcccccacagcatcgccctacggaatcatgccc
tccagccccacagtgcccggctctggcggcgcctccatcctgcccttctcctccttcccc
tcggtcaagcagaagagtgccttcgcgccagtcatccgcccgcagggctccccctcccca
gcctgcccaagcgccgggggcaacggcttcagagccatgactggtcttgtgatacctcca
atgtaa
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