Polyodon spathula (Mississippi paddlefish): 121303036
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Entry
121303036 CDS
T07273
Name
(RefSeq) leucine-rich repeat LGI family member 3-like
KO
K19999
leucine-rich repeat LGI family member 3
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121303036
Membrane trafficking [BR:
pspa04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
121303036
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EPTP
LRR_8
LRR_5
LRR_9
LRR_4
LRRCT
LRR_1
LRR_14
Matrix_Paramyxo_C
Motif
Other DBs
NCBI-GeneID:
121303036
NCBI-ProteinID:
XP_041089366
LinkDB
All DBs
Position
31:complement(7478532..7486822)
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AA seq
547 aa
AA seq
DB search
MQSQGFGKGWQWGSWCALCLLCLAASVGGRKPPKVPRCPVSCSCTKDSAFCVDSTAIPRS
FPPGIISLTLVNAAFTEIPERAFSHLHLLQFLLLNSNTFSQIADDAFNGVPHLQYLFIEN
NDIQSLSKRSFRGLKSLTHLSLANNNLKHLPRDIFKHLDMLTDLDLRGNSLSCDCKVKWL
VDWLGKTNTSVPAIYCASPPELQGRKLADLSAHDFNCITTEFVVYETFPFHSVSVESFEF
AGDLFVAFAQPGTGNCSLYVWDHVEMVFRKFNNISSSSAVYCKPVVIEDSLYMVLAQLFG
GSHIYRWDGDTNKFIKIQDIDTARIRKPNAVEAFRVEGEWFFVVADSSKAGSTSMYRWNS
NGFYSHQSLHPWHRDTHVEFLEMEGKPRLILSSSSQPPVVYQWNRSQRQFTFLYEIPGTS
DVQMVKHFVVRKDVYLCLTRFIGDSKVLRWEGQRFVEIQTLPSRGSMVVYPFSVGPRHYL
VLGSDFSFSRVYLWDALTKRFEPFQELNLRAPRGFSFVSIDNKDILLASSFKGHTLAYQH
LVVDLSA
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgcagagccagggttttgggaaggggtggcagtgggggtcgtggtgcgccctctgtctg
ctttgcctagcggcctccgtagggggaaggaagcctcccaaagtaccccgctgtcccgtc
agctgctcctgcaccaaagacagcgccttctgcgtcgactccacggctatccccaggagc
ttcccaccgggcatcatatctctgactctggtaaatgctgccttcactgaaatcccagag
cgagccttctctcatctccacctgcttcagttcctgctgctcaactcaaacaccttctcc
cagattgcggacgatgccttcaacggagtcccccatctgcagtacctattcatcgagaac
aacgacatccagtccctgtcgaagcgctccttccgagggctgaagtccctgactcatcta
tccctggcgaataacaacctgaaacatcttcccagagacatcttcaaacacctggacatg
ctgaccgacctggacctgagagggaactctctgagctgcgactgcaaggtgaagtggctg
gtggactggctgggaaagaccaacacctcagtgccggccatctactgtgccagcccccct
gagctccagggcaggaagctggccgacctcagtgcccacgatttcaactgcatcaccacg
gagtttgttgtctacgagaccttcccgttccactctgtctctgtggagtcttttgagttt
gcaggagacctcttcgtggcgttcgcccagcctggcacagggaactgcagcctgtacgtg
tgggaccacgtggagatggtcttcaggaagttcaacaacatcagctcgagctcagctgtg
tactgcaagcctgtggtgattgaagattctctctacatggtgttggctcagcttttcggg
ggctcacacatctacaggtgggatggcgacacgaataagttcatcaagatccaggacatc
gacacagcgcgcatccgcaagcccaacgccgtggaggccttccgcgtggaaggagagtgg
ttcttcgtggtggcggacagctccaaagccggctccaccagcatgtaccgctggaacagc
aacggcttctattcccaccagtccctgcacccctggcaccgagacacccacgtcgagttc
ctagagatggagggcaagcccaggctcatcctgtctagcagctcccagcccccggtggtc
taccagtggaaccgcagccagaggcagttcaccttcctctacgagatccctggcaccagc
gatgtccagatggtcaagcacttcgtggtgcggaaggacgtctacctgtgcttgacccgc
ttcattggggactccaaggtgctgcgctgggagggccagcgcttcgtggagatccagacc
ctcccttccaggggctccatggtggtctaccccttctctgttggcccgcgacactacctc
gtcctaggcagcgatttctctttctccagggtctacctctgggatgccctgactaagaga
ttcgaacccttccaggagctgaacttgagagccccccgtggcttcagtttcgtctccatc
gacaacaaggacatcctgctggcctccagcttcaagggccacacccttgcttaccaacat
ctcgtggtggacctgagcgcctga
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