Polyodon spathula (Mississippi paddlefish): 121303044
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Entry
121303044 CDS
T07273
Name
(RefSeq) LOW QUALITY PROTEIN: piwi-like protein 2
KO
K02156
aubergine
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pspa03036
]
121303044
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
121303044
piRNA pathway
121303044
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GFIT
Motif
Pfam:
Piwi
Piwi_N
PAZ
ArgoL1
Motif
Other DBs
NCBI-GeneID:
121303044
NCBI-ProteinID:
XP_041089373
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Position
31:complement(7171407..7181117)
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AA seq
554 aa
AA seq
DB search
MRFGVMKEHRSVTGEVTAFDGSILYLSIRLEEVWPGYSSCVKRTDGGLFLTVDVSHKVLQ
KDSVLDVMFLSKNYGITIKDLDQPLLVHRPKERSRPGEKVLTGEMLLLPELSFITGIPDK
MRKDFRAMKDLTMHINVSGEQHTNSLKELLRNINTSEDALTELGRWGLVISSEILLCEGR
TLPLETISLQSASFVTSADVQWSKEVVRDASISCVSIIFWAIFYPCRCSEQAEELVATFG
KVSELMGMRLDRPIAWSYGMELRDDHTETYMKSIHSQLTSEPNAQLVVCIITGNRDDLYG
ANKKLCSVQSPVPSQAINVRTISQPQKLRSIAQKILLQINAKLGGELWTVNIPLKQLMVI
GVDVHHDPRRGNRSILGFVASLNGTLTRWYSRAVFQMPNEEIINGYRICLLASLQKYFEV
NHNLPEKIVVYRDGVSDGQLKDVXDFEIPQLLKCFETFPRYEPKMAFIVVQKRISTTLYS
CSGERFGTQQGVVMTYFVFVFLFLTFKMCHMYWNSSGTIRVPAPCKYAHKLAFLSGQVLD
TEPAIQLSDKLHFL
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgcgcttcggtgtgatgaaagagcatcgttctgtcaccggagaagtcacagccttcgat
ggatcaattctgtacctctccatcagactggaagaggtgtggcccggctactcctcctgt
gtcaagcgcacagacgggggcctcttcctgactgtcgacgtttcccacaaagtgctccaa
aaagactccgtgctggatgtcatgtttctcagcaaaaactatgggattaccatcaaggat
cttgatcagcctcttcttgtccatcgccctaaagagagatcgagaccaggagaaaaggtt
ctgactggcgagatgctgttgcttcccgagctgtccttcataacggggatcccagacaag
atgaggaaggatttccgcgccatgaaggatttgaccatgcatatcaatgtgagcggggag
cagcacacaaactctttgaaagagctcctgagaaacatcaacaccagcgaagatgccttg
actgagcttggccgctggggtctggtcatcagctccgagatcctgctgtgtgaaggaagg
acccttccgcttgagacgattagcttgcagtctgcttcgttcgtgacctctgctgatgtc
cagtggtccaaggaagttgtgagggatgcatctattagctgtgtaagcattattttctgg
gccatcttctacccgtgccgctgctcggagcaggctgaggagctggtggccaccttcggg
aaagtgtccgagctgatgggcatgaggcttgaccggccaatcgcgtggagctacgggatg
gagctacgggatgaccacaccgagacctacatgaagagcatccactcgcagctcaccagc
gagccgaatgcgcagctggttgtgtgtattatcacgggcaatagggacgacctgtacggt
gccaataagaagctttgcagtgttcagtctccagtgccttcacaggccataaacgtcagg
accatctcgcagcctcagaagctccggagcatagcccagaagatcctgttacagataaat
gcaaagcttggaggggagctctggactgtaaacattcccttgaaacagctgatggtgatc
ggagtagatgtgcatcatgacccacgcagagggaacagatcgatcttgggctttgttgcc
agtctgaacggcacactgacgaggtggtattccagagcggtgttccagatgcccaatgaa
gagattatcaacgggtacaggatctgcctgctagcttctttgcagaagtattttgaggtt
aaccacaacctgcccgagaagatcgtggtataccgggacggtgtgtcggatgggcagctg
aaagacgtataggacttcgagatcccccagctgctcaagtgcttcgagaccttcccgcgg
tacgagcccaagatggcgttcattgtggtgcagaaacgaatcagcaccaccctctactct
tgcagtggagaacgatttggaacccaacaaggagtggtaatgacatattttgtatttgta
tttttgttcttgacctttaagatgtgccacatgtactggaactcgtccgggaccatcaga
gtaccagcgccgtgcaaatacgcccacaaactggccttcctgtccgggcaggtcctggac
accgagccagccatacagctgtccgacaagctgcatttcctgtga
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