Polyodon spathula (Mississippi paddlefish): 121303063
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Entry
121303063 CDS
T07273
Symbol
fancc
Name
(RefSeq) Fanconi anemia group C protein
KO
K10890
fanconi anemia group C protein
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
121303063 (fancc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pspa03400
]
121303063 (fancc)
DNA repair and recombination proteins [BR:
pspa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
121303063 (fancc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fanconi_C
EF-hand_2
TFCD_C
Motif
Other DBs
NCBI-GeneID:
121303063
NCBI-ProteinID:
XP_041089403
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All DBs
Position
2:88353067..88397063
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AA seq
557 aa
AA seq
DB search
MAQQSTSPALCLEYWQNKAVEWGQATTLASQQDVCLHLQQLKEFLQQIFQKLQHMNTTAA
MKTFPLVGQLLGRLCWNPYVVADEESQRTLLQCLWCLYSAEPQNAIELKANGWIQSLIRH
LISESETENNSFMKILGYTSEEYHSNVVKCMVSSLVTELRESCCNGIHMPKRFTPDRLHS
LSVFCIPLVTCSEAAPLIEALLTCCEFGSGETLSADFLKAVDTALLQKKIGLQETVTIGL
WLRYLPSLENATIHLIETVVSIPHFSPQEVESLVKDSLLPKASACHPHIFMIVGAIFRNI
LLESDGNLLVQTLIQMFTRSFLQALLFGEAQDKPPLKAFFPHSPQPLLMALLKHPSDVPS
QVWPQHLLCIVETLKVAIEDKDNGGSQLGLFENWFLLVHCGDWVDIAAQQLIESKAETSE
ALLWLLAFYHHPNNENQQRTKLLAVARKVCDQLKVLFRSTTLSLSHLQTSLDLAEANSEE
SGAKYLFNQLFLNFLLFSAGGQVIAKDAVHLMTHGNLLNGISAMLAGAEHRLNSYGIMDY
KAHRTLKLLQEYLKHKA
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggcccagcagagcaccagtcctgctctctgcttggagtattggcagaataaagctgta
gagtggggacaggccaccactttggcatcccaacaagatgtctgcctacacctgcaacaa
ttaaaggagttcctacagcagattttccaaaagttgcagcatatgaacaccactgcggcc
atgaagacatttcctctagtcggtcaattgcttggaagactctgttggaacccatatgtt
gtagcggatgaagagagccaaaggactctgctgcagtgtttatggtgtctatacagtgct
gaaccacagaatgccatcgaattaaaagccaatggctggattcagagcttgatacggcat
cttatttcggaatctgagacagagaacaattccttcatgaagattctgggatatacatcg
gaggagtatcattcaaatgtagtgaaatgtatggtttcatcattagtgacagagctaaga
gaaagctgctgtaatggaattcacatgcctaaaaggtttacacctgatagactacacagt
ctgtcagttttctgtatacctcttgtcacttgttcggaagctgctcccttaatcgaagcc
ctgcttacgtgttgtgaatttggttcaggagagacactcagcgcagacttcttaaaagct
gttgacacagcactgctgcagaagaagattgggctgcaggaaacggtaaccattggcctc
tggttgcgctaccttcccagtcttgaaaatgccacaatacatctaattgaaacagttgtt
tcaattccacacttttctccacaagaagtggaaagcttagtcaaggattcattgctgccc
aaagcttcagcctgccaccctcacatttttatgatagtaggcgctatttttaggaacata
ctgctggagtctgatggaaaccttttagtacagacactcatacagatgtttactcggagc
ttcttgcaggcactgctatttggggaagcacaggataagcctcccttgaaggctttcttt
cctcacagtccacagcctctattgatggcacttctaaagcatccctctgatgtgccctca
caagtgtggcctcaacatttactgtgtattgttgagacattaaaagtggcaatagaggac
aaagacaatggagggtctcaactaggcctctttgagaattggttcttgcttgtccattgt
ggagattgggtggatattgctgcacagcagctaattgagtcaaaagcagaaacctcagag
gccctactgtggcttttggcattttaccatcatccaaacaacgaaaaccagcagaggacc
aaactactggcagttgcaagaaaagtctgtgatcagctgaaggtgctcttccgcagtaca
acgctgtctctctcacatcttcagacgtctttagaccttgctgaagcaaactcagaagaa
agtggcgcaaagtatctgtttaatcagctctttctgaacttcttgctcttctctgctggt
ggacaagtaattgcaaaggatgctgtccatctgatgacacatggaaatttactaaatgga
atttctgctatgcttgctggggctgaacacagactaaacagttatggaataatggactac
aaagctcacagaactctgaagctacttcaggaatatcttaaacacaaggcttaa
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