Polyodon spathula (Mississippi paddlefish): 121303105
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Entry
121303105 CDS
T07273
Name
(RefSeq) synaptobrevin homolog YKT6
KO
K08516
synaptobrevin homolog YKT6
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04130
SNARE interactions in vesicular transport
pspa04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
121303105
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
121303105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121303105
Membrane trafficking [BR:
pspa04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Ykt6
121303105
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Gene cluster
GFIT
Motif
Pfam:
Longin
Synaptobrevin
Motif
Other DBs
NCBI-GeneID:
121303105
NCBI-ProteinID:
XP_041089498
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All DBs
Position
31:3700731..3729628
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AA seq
198 aa
AA seq
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MKLYSLSVLHKGASKANLLKAAYDLSSFSFFQRSSVQEFMTFTSALIVERSSHGSRASVK
EQEYLCHVYVRNDSLSAVVIADNEYPSRVCFTLLDKVLDEFSKQVDRIDWPSGSPATINY
TTLDGYLAKYQNPREADPMSKVQAELDETKIILHNTMESLLERGEKLDDLVQKSEHLGNQ
SKAFYKTARKQNSCCEIM
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgtacagcctgagtgttctccataaaggggcttccaaagccaacctcctcaaa
gcagcctatgacttgtcctccttcagcttctttcagaggtccagtgtgcaggagttcatg
acctttaccagcgccctgattgtggaacgttcatcgcatggaagccgggcgtctgtcaag
gaacaagagtatctgtgccacgtgtacgtgcgtaacgactcgctgagcgctgtggtgatc
gctgacaacgagtacccttccagagtctgcttcactctgctcgataaggtattggatgaa
ttctcgaagcaggtggacaggatagactggccttctggctctccagctacaatcaactac
acaacactagacggttacctcgccaaataccagaatcctcgggaggctgatcctatgtcc
aaagtacaggcagaactggatgaaaccaaaatcattctgcacaacacaatggagtccttg
ttggagagaggtgagaagctggatgatttagtccagaagtctgaacacttgggaaaccaa
tccaaagccttttacaaaactgctcgcaagcagaactcgtgctgtgagatcatgtga
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