Polyodon spathula (Mississippi paddlefish): 121303185
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Entry
121303185 CDS
T07273
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 1-like isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00061
Fatty acid biosynthesis
pspa00071
Fatty acid degradation
pspa01100
Metabolic pathways
pspa01212
Fatty acid metabolism
pspa03320
PPAR signaling pathway
pspa04146
Peroxisome
pspa04216
Ferroptosis
pspa04920
Adipocytokine signaling pathway
Module
pspa_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
121303185
00071 Fatty acid degradation
121303185
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
121303185
09143 Cell growth and death
04216 Ferroptosis
121303185
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
121303185
03320 PPAR signaling pathway
121303185
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pspa01004
]
121303185
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121303185
Enzymes [BR:
pspa01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
121303185
Lipid biosynthesis proteins [BR:
pspa01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
121303185
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of breast milk
121303185
Exosomal proteins of breast cancer cells
121303185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
Motif
Other DBs
NCBI-GeneID:
121303185
NCBI-ProteinID:
XP_041089642
LinkDB
All DBs
Position
31:86224..101593
Genome browser
AA seq
730 aa
AA seq
DB search
MKPNTIPVGSRGLEPNQGECPGDVGSMQIQELLKSLGAQGCLCFPDFEEIRKYVHSLSTP
SLIGLGAFATLAAYWLATRPRPIRPPCDLEHQSVPVQGDPSCRRSALLKNETLLDFYYKD
TKTAYEMFQRGLRISGEGPCLGFRKPKGPYEWISYKEVSDQAEFLGSGLLHRGCLPSPNQ
FIGVFAQNRPEWVIAELACYTYSMAVVPLYDTLGEEAMVHILNIAEISMVICDKPEKAAT
LLVNVEQSLTPGLKTVILMNSCNTALLERGRNCGVEILQFRDIMEQGRQNHKAPVPPSPD
DLAVVCFTSGTTGKPKGAMITHGNIASNTSSVIKILEGSFVIRQEDVTISYLPLAHMFER
MIQVSMFCHGARVGFYQGDIQLLMDDIKTLKPTFFPVVPRLLNRIYDKILGSVASPLRRA
VLQYAVRWKQAELSSGIVRNNSFWDLLLFNRIQASLGGNLRFILTASAPISPSVLTFLRA
VLGCLIFEGYGQTECTAGCTFSMPGDWTAGHVGAPLPCALVKVVDIEDMNYLASNGEGEI
CIKGPSVFQGYLKDAEKTSEALDSQGWLHTGDVGKWLPNGALKIIDRKKHMFKLSQGEYI
APEKIENVYLRSAALLQVFVHGDSLQSHLIGIVVPDPEVFPGWAQEKGIVGSYDELCSNQ
EVKEAILEDMTRLGKEAGLKSFEQVKDLYIHPEMFSIFNGLLTPTMKARRADIRKRFQGE
ISRLYSKSAL
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgaagcctaatacaattccagttggatcacgtggtctggaaccaaaccaaggagaatgt
cctggggacgtcggcagcatgcagatccaggagttgctgaagagcctgggggcccagggc
tgcctgtgtttcccagactttgaggagatccgaaagtacgtccacagcctgtccacgccg
tccctgatcgggctgggtgctttcgccactctcgctgcttactggctggccacacgacca
cgacccatccggccgccatgcgacctggagcaccagtctgtaccagtgcagggggacccc
agctgccggaggtcggctcttctgaagaacgagactctgttggacttttactacaaggac
acgaagacggcctacgagatgttccagagggggctccggatctcaggtgaaggaccctgc
ctcgggttcaggaaacccaaaggtccctatgagtggatctcctacaaagaggtttcggac
caggctgagttcttgggctctgggctcctgcaccgaggctgtctgccttcaccaaaccag
ttcatcggggtctttgcacagaaccgacctgagtgggtgattgctgagctggcctgctac
acgtattccatggctgtggtccctctgtatgacactctgggtgaagaggcgatggtgcac
attctcaatatcgcggagatctccatggtgatctgtgacaagcctgagaaggcggcgact
ctgctggtcaatgtggagcagtctctgacccctggcctcaaaaccgtcatcctcatgaac
tcatgcaatactgccctgctggagagggggaggaactgcggggtggagatactgcagttc
cgagacatcatggaacaaggtcgtcagaatcacaaagccccagttcccccaagccccgat
gatctagctgtggtgtgctttacaagtggaaccacagggaaacccaaaggggcgatgatc
actcacgggaacattgcctccaacacctcgtctgtgatcaagatcctggagggttcattt
gtgatccgccaggaagacgtcaccatttcatacctgccgctcgctcacatgtttgaaagg
atgatccaggtctccatgttctgccacggcgcccgggtcgggttctatcagggcgatatc
cagcttctcatggacgacatcaagaccctcaagccaaccttcttccccgtggtgcctcgg
cttctcaacaggatctatgacaagatcctgggaagcgtcgcctcccctttgaggagggct
gtcctgcagtatgctgtgcggtggaagcaggcagagctgagcagcggcattgtgaggaac
aacagcttctgggacctgttgcttttcaacaggatccaggccagtctgggtggaaacctg
aggtttatattaaccgcgtcggcgcccatctcccccagtgtgctcaccttcctccgggct
gtgctgggctgcttgatattcgaaggttacgggcagactgagtgcactgccggctgcacc
ttctccatgccaggagactggactgcaggtcacgtcggagccccgctgccctgtgccttg
gtgaaagtggtggatatcgaggacatgaactacctggcatcaaacggagagggggagatc
tgtattaaagggcccagcgtgtttcagggctatctgaaggatgcagagaaaacgtccgag
gcgctggactcgcagggctggctgcacacgggggacgtggggaagtggttaccgaacgga
gccttgaagatcattgatcggaagaagcacatgttcaagctgtcgcagggagagtacatc
gcccccgagaagatcgagaacgtgtacctgcggagcgcagccctgctgcaggtgtttgtg
catggagacagtctgcagtctcatctcatcggaatagttgttcctgacccagaagtgttt
cctggctgggctcaggaaaagggaattgtgggatcgtatgatgagctctgcagcaatcag
gaggtgaaggaggcaatcctggaggacatgacaaggcttgggaaggaagccgggctcaag
tccttcgaacaggtgaaagatctctacattcatccagaaatgttcagcatcttcaacggg
cttctcaccccgaccatgaaagccagacgggccgacatccggaagcggttccagggtgag
atcagcaggctgtactccaagtctgccctttaa
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