Polyodon spathula (Mississippi paddlefish): 121303192
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Entry
121303192 CDS
T07273
Name
(RefSeq) rho-related BTB domain-containing protein 2-like isoform X1
KO
K07868
Rho-related BTB domain-containing protein 1/2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121303192
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121303192
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
pspa04031
]
121303192
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
121303192
GTP-binding proteins [BR:
pspa04031
]
Small (monomeric) G-proteins
Rho Family
RhoBTB
121303192
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTB
Ras
Roc
Motif
Other DBs
NCBI-GeneID:
121303192
NCBI-ProteinID:
XP_041089660
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Position
31:complement(7993974..8022251)
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AA seq
721 aa
AA seq
DB search
MILATGLFRSQLMDSNMDYERPNVETIKCVVVGDNAVGKTRLICARACNATLTQYQMLAT
HVPTVWAIDQYRVCQEVLERSRDVVDEVSVSLRLWDTFGDHHKDRRFAYGRSDVVVLCFS
IANPNSLHHVKTMWYQEIKHFCPRAPVILVGCQLDLRYADLEAVNRARRPLARPIKSNEI
LAPEKGREVAKELGVPYYETSVVAQFGVKDVFDNAIRAALISRRHLQFWKSHLRNVQRPL
LQAPFLPPKPPPPMITVPKPPSTSEEHPARLLEDPLCADVILILQDQQRIFAHKIYLSTS
SSKFYDLFLMDLSPGAAGSPNGGSLQTQFQNQTLTGRDLLMRAASFDVCESSDDGDRSNL
RISTSDGTLIGDSRESGRRGRLLSSWSRAFVSIQEELVDDPVTYSPRLMTVVKMDPSVQL
APFRAVLRYLYTGQLDEHEKRLMHIAHIAELLEVFDLRMMVANILNNEGFMNQEITKAFH
VRRTNRVKECLAKGTFSDVVFKLDDGTILAHKPLLISSCDWMAAMFGGPFMESSTKEVLF
PNTTRSCMRAVLEYLYTGQFCSRPDLDAMELIVLANRLCLPHLVALTELYTVTILMESAL
MGADIDGDVLVYLEMAQFHCAHQLTDWCLHHICTNYNNVCRKFPREMKAKSSENQEHFEK
HRWPPVWYLKEDDHYQRARREREKEDYLCQKRQAKRKWLFWSSPASPSPASSSHHSSSAV
V
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgatcctggccactggcttgttcaggtcccagttgatggattctaacatggactatgaa
aggccaaacgttgaaactatcaagtgcgtggtggtcggcgacaacgccgtcgggaagacc
cgcctcatctgtgcccgggcgtgcaatgccacgctgactcagtaccaaatgctcgccacg
cacgtgcccacagtctgggccatcgaccaataccgcgtctgccaggaggtcctggagcgg
tcccgtgacgtggttgatgaggtcagcgtgtccctgcgtctctgggacacgttcggggat
caccacaaggaccggcgcttcgcctacggaaggtcggacgttgtggtgctgtgtttctca
atcgcgaaccccaactccctgcaccacgtcaagaccatgtggtaccaagagatcaagcac
ttctgcccccgagcgcctgtcatcctggtgggctgccaactggatctccgctacgcagac
ctggaggccgtcaaccgggcacgacgccccctagccagacccatcaagtccaacgagatc
ctagccccggagaagggacgagaggtggcgaaggagctgggggtgccctactacgagacc
agtgtggtggcgcagttcggggtgaaggacgttttcgataacgccatccgcgccgccctc
atctcccgccgccacctgcagttctggaagtcccacctgcgcaacgtacagaggcccctg
ctgcaagcccccttcctgccgcccaagccccctccgcccatgatcacggtgcccaagcct
ccgtccaccagcgaggagcacccggccaggctgctggaagaccctctctgcgccgacgtc
atcctcatcctgcaggaccagcagcgcatcttcgctcacaagatctacctctccacctcc
tcctccaagttctatgacctgttcctcatggacctgagcccaggggccgcaggctctccc
aatggggggagtctccaaacccaatttcagaaccagaccctgaccggcagggatcttctc
atgagggctgccagctttgatgtgtgcgagagcagtgacgatggagaccgctccaacctg
aggatttccaccagcgacgggacgctgataggggacagccgcgagagcggcaggaggggc
cggctgctctcctcctggagccgggccttcgtgagcatccaggaggaactggtggacgac
ccggtgacctacagcccgcgtctgatgactgtggtaaagatggacccctcggtgcagctg
gccccgttccgcgcagtcctgcgctatctgtacacgggtcagctggacgagcacgagaag
aggctgatgcacatcgcgcacatcgccgagctgctggaggtgttcgacctgcgcatgatg
gtggccaacatcctcaacaatgagggcttcatgaaccaggagatcaccaaggccttccac
gtgcgccgtaccaaccgggtcaaggagtgcctggccaagggaaccttttccgatgtggtc
ttcaagttggacgacgggacgatcctcgctcacaagcccctcttaatctccagctgtgat
tggatggctgccatgttcgggggtccctttatggagagctccacgaaggaggtgctgttc
cccaacaccactcggagctgcatgcgggccgtgctggagtatctgtacacggggcagttc
tgctcgcggcctgacctcgatgccatggagctcatagtgctggcaaaccgcctctgcctg
ccgcacctcgtcgcgctcacagagctgtacacagtgacaatactgatggagtcagcgctg
atgggagctgacatcgatggagatgtgctggtgtacctggagatggcgcagtttcactgt
gctcaccagctcacagactggtgcctccatcacatctgcaccaactacaacaacgtctgc
cgcaagtttccaagagagatgaaggccaagtcctccgagaaccaggagcactttgagaag
caccgctggccgccagtctggtacctgaaggaagatgaccattaccagcgagcccgcagg
gagcgcgagaaagaggactacctctgtcagaaacgacaggccaagcgcaagtggctcttc
tggagctctcctgcctccccttcccccgcctcctcctcccaccacagctcctctgccgtc
gtttga
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