Polyodon spathula (Mississippi paddlefish): 121303223
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Entry
121303223 CDS
T07273
Name
(RefSeq) PDZ and LIM domain protein 2-like
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121303223
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
121303223
Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
121303223
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GFIT
Motif
Pfam:
PDZ
DUF4749
PDZ_6
LIM
PDZ_2
DmmA-like_C
Motif
Other DBs
NCBI-GeneID:
121303223
NCBI-ProteinID:
XP_041089726
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All DBs
Position
31:8038124..8067142
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AA seq
366 aa
AA seq
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MSLNVNLIGPSPWGFRISGGRDFKKPIAVSKVSAGSKAEVADLRPGDVILEINGQGTADM
LNVEAQNKIKTSKAQLLLTVDRSEPASPGQTNGILTPERLSSQFQGALQVSRDENQNYSK
PSHRSPCSTEPLAPRHSPGYSKPDTPPSARSFQSRSWSPVEKSFSLKVSLDSPGPQEPVA
DVRRNSLPRIPTPPGWTPPRSPRERPLDSWETRAFPSSSSDAAMHKFDRDSEVYKMIQEN
KESRTAPRQSSTFRLLQEVLESDEQAATVRFPGAFSPSPQKAVGSVAGVTKFHICEKCDT
SIVTQAVRIVEDRYRHPECYTCTHCGLNLKMRGHFWVGEEMFCEKHARERYQGPSGATPT
TVHPKS
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgaacgtgaatttgattggcccgtctccctggggcttcaggatatctggaggg
cgggacttcaagaagcccatcgctgtttccaaggtgagtgccggcagcaaggcagaggtc
gctgaccttcgacccggcgatgtcatcctggagattaatggtcagggcacagcagacatg
ctcaacgtggaggcccagaacaagatcaagaccagcaaggcacagctgcttctcactgtg
gacaggtcggagcctgcttctcccggacagacgaacgggatcctgaccccggaacgctta
tcctcgcagttccagggggcgctccaggtcagccgagacgagaaccagaactacagcaag
ccctcgcaccggagcccctgctccactgagcctctcgccccccgacactcccctggctac
agcaagccagacacgccccccagcgccaggagcttccagtctcgctcctggtctcctgta
gaaaagagtttcagcctcaaagtgtccttggactccccaggtccccaggagccagtggca
gatgtgcggaggaactccctaccccgcatccccacccccccaggctggaccccccctcgc
agccccagagagcgccccctggattcgtgggagacgagggccttccccagcagcagctcg
gacgcagccatgcacaagtttgacagagactctgaggtgtacaagatgatccaggagaat
aaggagtcccgcacagccccccggcaatccagcaccttccgcctgctgcaagaggtgctg
gaatctgatgagcaagcggcgacggtccgattcccaggagcgttctctccgagcccgcag
aaagcagtgggctctgtcgccggggttaccaagttccacatctgtgagaaatgcgacacc
agcatcgtgacgcaggcggtgcgcatcgtggaggatcgataccgacaccccgagtgctac
acctgcacgcattgcggcctcaacctcaagatgaggggacacttctgggtgggggaggag
atgttctgcgagaagcacgcccgcgagcgataccaggggccctcgggggccacccccaca
accgtccaccccaagtcctag
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