Polyodon spathula (Mississippi paddlefish): 121303229
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Entry
121303229 CDS
T07273
Name
(RefSeq) E3 ubiquitin-protein ligase UHRF2-like isoform X1
KO
K15713
E3 ubiquitin-protein ligase UHRF2 [EC:
2.3.2.27
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121303229
Enzymes [BR:
pspa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121303229
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
121303229
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TTD
SAD_SRA
ubiquitin
PHD
zf-C3HC4_2
zf-C3HC4
PHD_2
Rad60-SLD
zf-RING_2
Med8
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
121303229
NCBI-ProteinID:
XP_041089735
LinkDB
All DBs
Position
2:88913056..88992332
Genome browser
AA seq
863 aa
AA seq
DB search
MWIQVRTIDGKETRTIDDLSRLTKIECLRLKIHECFNVSPEQQRLFYRGKQMEDGQTLFD
YNVGLNDIVQLLIRSQADPPDTKGKKKDEDSVGGSSSSNNGKKSLNPLSDNQPSTSTRTF
LIDPGIGMYKINELVDCRDVSIGAWFEASIENVTRATKGHNGKASAKMSKRTNGKLEIDQ
NHSSQDSNGKSTFNLDSAPSTSYTNFSDNEEDVIYHIKYDDYPENGVVEMCADDVRARAR
TLLKWDHLRVGQMVMVNYNIEVPEERGFWFDAEITSLKEISRTNKEVRVKILLGGPEDVI
NDCKLIFLEEIYKIEKPGAPPLTSADGQFKRKSGPECKHCKADPDSECRFCSCCVCGGKQ
DAHMQLLCDECNMAFHIYCLNPPLSRIPEDEDWYCPTCKNDTSEVVKAGEKLKQSKKKAK
MPSAHTESQRDWGKGMACVGRTKECTIVPSNHYGPIPGIPVGTTWKFRVQVSEVGVHRPH
VGGIHGRSNDGSYSLVLAGGFEDEVDRGDEFTYTGSGGRDLSGNKRIGEHSFDQTLTHMN
RALALNCDAPLNDKDGAESRNWRAGKPVRVVRSSKGRRISKYAPEEGNRYDGIYKVVKYW
PEIGKCGFLVWRYLLRRDDLEPAPWTPEGLERTNKLGLSVQYPEGYLEAMANKVKKDKTK
RNSGKQKKEKGEKQVVEKMKKKEEEDEEEKEEEKEKDEDEEEEEEEEEEEVVKPEPEAQS
NGSRKRPQEKVIQEDEIPAKTTKLADKGEAFQLSPQQQWLIKEDCLNKKLWDEALGCLIE
GPSFLRKVEEIFMCVCCQELVFQPVTTECLHNVCKTCLQRSFRAEVYTCPACRHDLGKDY
IMVLNKILQSLLDQFFPGYSKGR
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atgtggatccaggttcggaccatagacggcaaagagacccgaaccatagacgatctatct
agattaacgaaaattgaatgtttaaggttgaaaatccacgaatgcttcaacgtgagccct
gaacaacagagactgttttacagggggaaacagatggaagacgggcagactctgtttgac
tacaatgtgggactcaacgacattgtgcagctgctgatccgctcgcaggcagaccctccc
gacactaaaggcaagaagaaagacgaagacagcgtcggcggctccagctccagcaacaat
ggcaagaaatccttgaatccgctgtcagacaatcagccctccacgtcaactcgcacattc
ctcattgaccctggcatcggcatgtacaagataaacgagctggtggactgtcgggatgtg
agcattggggcctggtttgaagccagcatagaaaatgtgactagagccacaaagggacat
aatggcaaggcttcggctaaaatgagcaaaaggactaacggaaagctggaaatagaccaa
aaccattcatcccaggacagtaatgggaaatccacctttaacttggacagtgcaccttcc
acctcttacacaaacttctcggacaatgaggaggatgttatttatcatatcaaatatgac
gactatcctgaaaatggtgttgttgaaatgtgtgcggatgacgttcgggcccgtgcgcga
acccttttaaaatgggatcaccttcgggttggccagatggtaatggtgaactacaacatt
gaggttccagaagagcgaggcttctggttcgatgcagaaatcacctctttgaaagagatc
tcgagaacaaataaggaagtcagagtgaaaatccttttagggggcccagaggatgtgatt
aatgactgcaaactcatctttttggaggagatctacaagatagagaaaccaggggcacct
ccactgacttctgcagacgggcagtttaaacggaaaagcgggccggagtgcaagcactgc
aaggcggaccctgactcggagtgccggttctgctcgtgctgcgtgtgtggcgggaagcag
gatgcccacatgcagctgctgtgcgacgagtgcaacatggcttttcacatctactgtctc
aatccaccgctcagcaggatccccgaggatgaggactggtactgccccacttgcaaaaat
gacaccagtgaggttgtgaaagcaggagagaaattaaagcagagtaaaaagaaggccaag
atgccgtctgcacacactgaaagccagcgagactggggcaagggaatggcctgcgtgggc
cgtacgaaggaatgcacaatcgtaccttccaaccactatggacctatccctggcatccca
gtcggaacaacgtggaagttcagagtgcaggtgagtgaagtgggagtccacagaccgcac
gtgggaggaatccatggccgcagtaatgacggatcctattcattggtgttagctggaggg
tttgaagatgaagtggacaggggagatgagtttacctacactgggagtggaggtagagat
ctctctggtaacaaacgcattggggagcattcctttgaccaaacactgacccacatgaac
agggcgctggcactcaattgtgacgcacctctgaatgacaaggacggagcagagtccagg
aactggcgggctggcaagcctgtccgcgtggtccggagctccaaggggcgccgcatcagc
aagtatgctcccgaagagggcaatcgatacgatgggatttacaaggtggtgaaatactgg
ccagaaattgggaagtgtggtttcttggtttggcgttacttgctgagacgtgatgatttg
gagccagcgccttggacgccagaagggctggagaggacaaataaacttggcctgtcagtg
cagtatccagagggatatctggaagcaatggctaataaggtgaaaaaagacaaaaccaaa
aggaattctgggaaacaaaagaaggagaaaggagagaaacaagtagtagagaagatgaaa
aagaaggaagaggaggatgaggaggagaaggaggaggagaaggagaaggatgaggacgaa
gaggaagaggaagaggaggaggaggaggaagtggtgaaaccggaaccggaggcccagagc
aacggcagccggaagagacctcaggaaaaagttatacaggaagatgaaatcccagctaag
accacaaagctggcagacaagggggaagccttccagctgtccccacagcagcagtggctc
atcaaagaggactgtctcaacaagaagctgtgggacgaggcactcggctgtctcattgag
ggaccgagcttcctgaggaaggtggaagagatcttcatgtgcgtatgttgccaggagttg
gttttccagcctgtcacaacagagtgtcttcacaatgtttgcaagacatgcttgcagagg
tcttttcgtgcagaggtgtacacctgcccagcctgccgccatgacctgggaaaggattac
atcatggtcctcaataagatcctccagtccctcctggaccagttcttccctggctacagc
aaaggtcgatga
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