Polyodon spathula (Mississippi paddlefish): 121303238
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Entry
121303238 CDS
T07273
Name
(RefSeq) low molecular weight neuronal intermediate filament-like
KO
K04572
neurofilament light polypeptide
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pspa01009
]
121303238
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pspa04812
]
121303238
Protein phosphatases and associated proteins [BR:
pspa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121303238
Cytoskeleton proteins [BR:
pspa04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
121303238
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
DUF3450
Fib_alpha
Motif
Other DBs
NCBI-GeneID:
121303238
NCBI-ProteinID:
XP_041089752
LinkDB
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Position
31:complement(1135341..1139970)
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AA seq
494 aa
AA seq
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MSYSTDLYSSSSSYRKIFGEHPRVSSRMSSSSSPVRSAGYRPGPALHHRSYGSSSVVSSS
AFRKVGAGRPTSYSAGLGSADHFDLSQSTAVTNELKIIRTNEKEQLQGLNDRFVTFIDKV
HMLEQQNKVLEAEVTLLRQRHSEPSRLHELYEQEIRELRSRVEELDHEKSQMQLDCVQMN
DGLEKLKEKLDEEVRMKEEAEATLKGYRKDVDNATLTRLELEKKVESLLDEIAFLRKVHE
EEVGELQSAVQASQVSVEMDVSKPDLTLALKEIRAQYENLSARNQQSAEEWYKSKTANVT
EAAVRHNDALRQSKEELSEYRRQLQSRTLEIESLRGHNEALERQLRELEDRHGNEINELQ
ETAQQLENALRTTKGEMSRHLREYQDLLNVKMALDIEIAAYRKLLEGEETRLSTVGGGGG
GSLLQSGYSSYTSASPFAGMRSYSSSTSAAYRQRMAKPEEPEEEEEEEEEEEGEEGQGEE
EEKPTAPADKTSKD
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgagttactccactgatctctactcatcctccagctcctatcggaaaatattcggagag
catccgcgggtctcttccagaatgtcttcgagcagcagcccggtccgatctgccggttac
cgacccggcccggctctgcaccaccgcagttacggctcttcctcagtcgtctcttcctcc
gctttccgaaaagtcggcgcaggccgccctacctcctactccgctgggctgggcagcgcc
gatcatttcgacctctcccagtccacagccgtcaccaacgagctcaaaatcatcaggacc
aacgagaaggaacagctgcaagggctgaacgaccgcttcgttaccttcatcgataaggtc
cacatgctggagcagcagaacaaggtcctggaggccgaggtgacgctgctgagacaacgc
cactccgaaccgtcccggctccacgagctctacgaacaggagatccgcgagctccggtcc
cgggtggaagagctggaccacgagaagagccagatgcagctggactgcgtgcaaatgaac
gacgggctggagaagctgaaggagaagctggacgaggaggtgaggatgaaagaggaggcc
gaggcgaccctcaaagggtaccgcaaggacgtggacaacgccaccctcacccgactggag
ctcgagaagaaagtggagtcgctgctggacgagatcgccttcctcaggaaagtgcacgag
gaggaggtcggggagctgcagagcgctgtccaggcgtcccaggtgtcagtggagatggac
gtgagcaagccagacctgactctggctctgaaggagatccgtgcccagtacgagaacctc
tccgccaggaaccagcagtcggcggaggagtggtacaagtccaagaccgccaacgtgacg
gaggcggcggtgcgtcacaacgacgcgctcaggcagtccaaggaggagctgagcgagtac
cggcgccagctccagtcccggaccctggagatcgagtcgctgcgcggccacaacgaggct
ctggaacgccagctgcgcgagttggaggatcgccacggcaacgagatcaacgaactgcag
gaaaccgctcagcagcttgaaaacgctttgaggacaaccaaaggggagatgtcccgtcac
ctgcgagaatatcaggacctgcttaacgtcaagatggctctggacattgaaatagcagcc
tacaggaagctgctggaaggcgaggagactcgtctgagcacagtgggaggggggggagga
ggcagcctgctgcagtcaggctattccagctacacgtcagcctcccccttcgctggcatg
aggtcttactccagcagcaccagcgctgcctaccgccagaggatggccaaaccggaggag
cccgaggaagaggaggaggaggaagaggaggaggagggggaggaaggacagggggaagag
gaggaaaaaccaaccgcccccgctgacaaaaccagcaaggattga
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