Polyodon spathula (Mississippi paddlefish): 121303240
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Entry
121303240 CDS
T07273
Name
(RefSeq) glycine dehydrogenase (decarboxylating), mitochondrial-like
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00260
Glycine, serine and threonine metabolism
pspa00630
Glyoxylate and dicarboxylate metabolism
pspa00785
Lipoic acid metabolism
pspa01100
Metabolic pathways
pspa01200
Carbon metabolism
Module
pspa_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
121303240
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
121303240
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
121303240
Enzymes [BR:
pspa01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
121303240
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Pyridoxal_deC
Motif
Other DBs
NCBI-GeneID:
121303240
NCBI-ProteinID:
XP_041089754
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All DBs
Position
2:complement(88999906..89037048)
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AA seq
1032 aa
AA seq
DB search
MQKCSKSWGLLSRAVGIQSCSMKLCCRGSVLMGRWQAKNVINNFQNVRYISVIGIRSCGV
SITSRQIDKILPRHDDFSERHIGPGDKEKREMLDTLGLESIEELIDKTVPSSIRLRRSMK
MDDPVCENEVLETLYKIASKNKIWRSYIGMGYYNCSVPQAIQRNLLENSGWVTQYTPYQP
EVSQGRLESLLNYQTMVCDLTGMDVANASLLDEGTAAAEAMQLCHRHNKKMKFYIDPRCH
PQTIAVVQTRANYIGVIAELKHPHEMDFSGKDVSGVLFQYPDTEGRVEDFAGLVDRAHQN
GALACCATDLLAMCVLRPPGEFGVDITMGSSQRFGVPLCYGGPHAAFFGVKGSLIRMMPG
RMVGVTRDAAGKEVYRLALQTREQHIRRDKATSNICTAQALLANMAAMYAIYHGSQGLKH
IAKRVHNATLILSEGLKRAGHKLEHEMFFDTLKIQCGVAAKEILDRAAQCQLNLRLYSDD
VLGVSLDETVTERDLDNLLWVFGCESSAELIAEKMGDEKRGIFGTPFKRTSSFLSHTVFN
SYRSETNIVRYMKRLENKDISLVHSMIPLGSCTMKLNSSSELSPITWKEFANIHPFVPLD
QAQGYQQLFRELERDLCEITGYDKISFQPNSGAQGEYAGLAAIKAFLNAKGEAHRTVCLI
PKSAHGTNPASAQMAGMKIQSVELDKNGNIDVAHLKAMVDKHKENLAAIMITYPSTNGVF
EENVSDVCDLIHHHGGQVYLDGANMNAQVGLCRPGDYGSDVSHLNLHKTFCIPHGGGGPG
MGPIGVKQHLAPYLPSHPVIPLLSDDKARSLGTISAAPWGSSAILPVSWVYIKMMGARGL
THATEIAILNANYMAKRLESKYKILFRGARGCVAHEFILDVRPFKKSANIEAVDIAKRLQ
DYGFHAPTMSWPVSGTLMIEPTESEDKAELDRFCDALMSIRQEIADIEEGRMDSRINPLK
MSPHTLACISSSNWDRPYSREAAAFPLPFVRPESKFWPTIARIDDIYGDQHLVCTCPPME
AYESPFEQKMAS
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagtgttcaaaatcttggggtttgctctccagggctgttggcatacagtcctgt
agcatgaagctgtgctgcagaggaagtgttttaatggggagatggcaagcaaaaaatgtg
ataaacaattttcagaatgtcaggtatatcagtgtaattggaatcagaagctgcggtgtt
tccataacttcaagacagattgataaaatactaccccgacatgatgatttctccgaaaga
cacattggaccaggcgacaaagaaaaacgagaaatgctcgacactttgggtcttgagagt
attgaagaattaattgacaaaacagttccatcaagcatccgcttgcgacggagtatgaaa
atggatgacccagtttgtgagaacgaagttttagaaacactctacaagatagcaagcaag
aacaagatctggcggtcctatattggaatgggttactacaactgctcagtgccacaggcc
attcagcgcaacctgctggaaaactcaggatgggttacccaatacactccataccagcct
gaagtatcccaggggcgcctagaaagcttgctgaactaccagacgatggtgtgtgacctc
acaggcatggatgtggccaacgcctccctattggatgaaggtactgcagcggctgaggcc
atgcagctgtgtcacaggcacaataagaaaatgaagttttacattgacccacgctgccac
cctcagacaatcgcagtggtgcagacaagagccaactacattggagtgatcgcagagctg
aagcatccccacgagatggatttcagtggtaaagatgtctctggtgtactgttccagtac
ccagataccgagggaagagttgaggactttgcaggacttgtagaccgagcgcatcaaaat
ggggcactggcatgctgcgcgactgatctgctggccatgtgtgtcctgagaccacctggt
gagtttggggtggacatcaccatggggagctcgcagaggtttggagtgccgctctgctac
ggaggtccccatgctgccttttttggggtgaaaggaagcctgattagaatgatgcccggg
agaatggtgggagtcacaagagatgcagccgggaaagaggtgtatcgccttgctcttcag
acacgagagcagcacatcaggagggataaagccaccagcaacatctgcactgctcaggca
ctgcttgcgaacatggcagctatgtatgccatctaccatggttcacaggggctgaagcac
attgcaaagagagtacacaatgctactctaatcttgtctgaaggccttaagcgtgctgga
cacaagctggaacatgagatgttctttgacaccttgaagattcagtgtggagtggccgcc
aaagagatcctagatagggctgctcagtgtcagttgaacctccggctctacagtgatgat
gtgctcggagtgtcccttgatgagacggtgaccgaaagagatttagacaaccttctttgg
gtgtttggatgtgaatcctctgcggaattgattgctgaaaaaatgggggatgaaaaaaga
ggcatcttcggaactcctttcaaaaggacgagcagttttctctcgcatacagtttttaac
agttatcgctctgaaactaatattgttcgctacatgaaaagactggagaacaaagacatt
tcccttgtacacagcatgataccattgggttcttgcaccatgaaactcaacagttcttct
gaactttcaccaatcacttggaaagagtttgcgaacatccatcctttcgtgcctctagat
caggctcagggctaccagcagcttttcagggaactggagcgggacttgtgtgaaatcact
ggatacgacaaaatatccttccagccaaacagtggagcacaaggagaatatgctggcctg
gctgccattaaagcctttttaaacgcaaaaggagaagcacacaggacagtttgtctcatt
ccgaaatctgctcatggcacaaacccagccagtgcccagatggcagggatgaagatccag
tcggtcgaattggacaaaaacggaaacattgatgttgcgcacttaaaagccatggtggac
aagcacaaagaaaacctggctgctatcatgatcacctacccatcgacaaatggtgtgttt
gaggagaatgttagtgatgtttgcgacctgattcaccatcatggaggccaggtctacctt
gatggcgccaatatgaacgctcaagtgggactgtgtcgtcctggtgactacggatccgat
gtctctcacctaaacctgcacaaaacattctgcattccccacggagggggtggccctgga
atgggacccattggagtaaaacaacaccttgccccatacttgcccagtcatccagttatt
cctctgttgtctgacgacaaggcccgatccctgggcaccattagtgctgcaccatggggc
tcaagtgcaattttacctgtctcctgggtgtatatcaagatgatgggagccagaggtctg
acacatgcaactgaaattgccatactgaatgcaaactacatggcaaagagactagaaagc
aaatacaaaatccttttcaggggtgcaagaggatgtgttgctcatgaatttatccttgat
gtgagaccattcaagaaatctgccaacattgaggctgtagatattgctaagagactgcaa
gactatgggtttcacgccccgacaatgtcgtggccagtcagtggtacactgatgatcgag
cccacagagtcagaggacaaggctgagctggacagattctgtgatgccttgatgagtatc
cgacaggaaatcgctgacattgaggagggcagaatggactccaggattaaccctctaaag
atgtcccctcacacattggcttgcatttcatcttccaactgggatcgcccctactccaga
gaagctgcagcttttccattgccctttgtgagaccagagagcaagttttggcccaccatt
gcccggattgatgacatctacggagatcagcacttggtctgcacttgcccgccaatggaa
gcttatgaatctccatttgaacaaaaaatggcttcatga
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