Polyodon spathula (Mississippi paddlefish): 121303262
Help
Entry
121303262 CDS
T07273
Symbol
col8a2
Name
(RefSeq) collagen alpha-2(VIII) chain
KO
K23455
collagen type VIII alpha
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
121303262
NCBI-ProteinID:
XP_041089782
LinkDB
All DBs
Position
32:complement(6576065..6609781)
Genome browser
AA seq
691 aa
AA seq
DB search
MTLLLLLLPACLLLVLGSVSGGGYPPLPQMKYPQPMMKGPAGPPFREGKGQYLDMPPVLP
MGEPGPPGKPGPRGPQGPPGLPGKPGVGKPGHNGQQGPAGPPGFPGIGKPGLPGLPGKAG
GKGMPGPKGEGGPRGENGPRGLPGQPGLPGPVGLSVNGKPGPQGVRGNPGLTGEPGQKGP
PGIPGEPGLRGEIGNGIPGLPGARGPVGAPGPAGLSGPPGLGKPGLNGLPGPAGLNGEKG
NPGEPGAPGKEGDQGPRGPPGVDGVGKPGLDGLPGMPGPQGPKGELGNRGAPGFPGAPGY
GKPGLQGMKGDKGHDGIPGLPGYKGEPGMDGLPGEMGQEGIQGPPGIPGHMGLPGKYGLP
GLKGDIGPAGPPGAPGIQGKEGPNGLSGKPGAPGERGLPGPHGPPGQSGPKGEPGHIGLP
GAPGLPGVPGQKGQPGTTGSPGPRGISGIPGIQGPTGPIGPQGIPGLKGEHGLPGLPGEG
RLGQKGAPGPMGPPGKEGEAGLNGRPGPPGPPGPPGPPGAFINGEDTSIAGLHLPDGGVE
GASVPGAGKPQYGRGELSARVAPAFTAILSTPFPPSGMPIKFDRTLYNGLNAYNPATGIF
TSPASGIYYFSYHVHVKGTNIWVALYKNNVPATYTYDEYKKGYMDQASGSAVLELKENDQ
VWMQMPSDQANGIYSTEYIHSSFSGFLLCPT
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgacgctgctgctactgctgctgcctgcctgtctgctgctggtgctgggcagtgtttca
gggggaggttaccccccactcccccagatgaagtacccgcagcccatgatgaaggggcct
gcgggtccccctttccgagaaggcaagggacagtacctcgacatgcccccagtcctccca
atgggtgaacccggaccgccaggaaaaccaggaccgaggggccctcaagggcctcccgga
ttgccagggaagccaggagtcggaaaaccagggcacaacggacagcagggtcccgctggg
ccgccaggattccccggaataggaaagccgggattgcccggcctcccagggaaggcaggt
gggaaggggatgccggggccgaaaggagaagggggccccagaggggaaaacgggcctaga
gggttaccggggcaacctggccttccgggtccagtcggtctgtctgtgaatggcaagcct
ggacctcaaggtgtcagaggaaacccagggttgacaggggagccaggacagaaagggccc
ccagggatccctggagagcctggacttaggggggaaattgggaatggcattccaggttta
ccaggggcgagaggtccagtcggtgcgcctggtccagcggggctctctggcccgccaggg
ctcggcaagcctgggctgaatgggcttccaggaccagctgggctcaatggagagaagggt
aatccaggagaaccaggcgcaccagggaaggaaggagatcaggggccacgggggccccca
ggagtagacggggtggggaaacctggtttagatggacttccaggcatgccagggccacag
gggccaaaaggtgagctcgggaacagaggggctcctggattcccaggggcccctggctat
ggtaagccagggttgcaaggcatgaaaggagataagggccatgatggcattccaggacta
ccggggtacaagggggaaccagggatggatggactgccaggagagatgggccaagaggga
attcaggggcccccaggaataccgggccacatggggctcccagggaagtacggactgcct
ggtctgaaaggagatattggccctgctgggccgccaggggcccccggcatccaaggcaag
gaaggccccaatggcctctcaggaaaacctggggctcctggagaaaggggattgccgggc
cctcatggaccaccagggcaaagtggacctaaaggagaacctggacatattggtcttcca
ggggcccctgggttaccaggtgtgcccgggcagaaaggacagccagggaccacgggctcc
ccggggccgagaggcatttctggcatcccaggtatccagggtccgaccggcccgattggt
ccccaaggaatcccaggactaaagggggaacatggccttccgggcctcccaggggagggg
agactgggtcagaaaggagctccggggcccatgggcccccccggcaaggaaggtgaagct
gggctcaacggccgtcccggacccccagggcctccaggtcctcccggcccgccaggagcc
ttcatcaacggagaggacaccagcatcgccgggctgcacctcccggatggcggggtggag
ggcgcctcggtgccgggggctgggaagccgcagtacggtcggggcgagctgtcggcccga
gtggctccagccttcaccgccatcctgtcgacccccttccccccctccgggatgcccatc
aagtttgacaggactttgtacaacggcctcaacgcctacaaccccgccacgggaatattc
accagccctgcttcaggaatctattacttctcttaccacgtccacgtaaagggaacgaac
atctgggtggctctgtacaagaacaatgtgccggccacgtacacctatgacgagtacaag
aaaggctacatggaccaggcttcgggcagcgccgtcctggaactgaaggagaacgatcag
gtgtggatgcagatgccttcggaccaggctaacggaatatattccactgagtacatccac
tcgtccttctcggggttcctgctctgtcctacataa
DBGET
integrated database retrieval system
