Polyodon spathula (Mississippi paddlefish): 121303274
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Entry
121303274 CDS
T07273
Symbol
sdc3
Name
(RefSeq) syndecan-3
KO
K16337
syndecan 3
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04514
Cell adhesion molecules
pspa04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
121303274 (sdc3)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121303274 (sdc3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pspa00535
]
121303274 (sdc3)
Proteoglycans [BR:
pspa00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
121303274 (sdc3)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Syndecan
TGF_beta_GS
BUD22
Nop14
Pinin_SDK_N
CDC45
Motif
Other DBs
NCBI-GeneID:
121303274
NCBI-ProteinID:
XP_041089794
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Position
32:965591..976919
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AA seq
374 aa
AA seq
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MPRTLQQQAYRWRRGSEESTPEDQESSGGDDFFDDEDRFSGSGSGYPELDVEVKSEVLFR
TEEPVIISTTQALSPVPSAPPAALPVHPTPEETSTIPMATTTSVTTTVRQTPPTPSSGPP
ESTTQLQEAVLEPIGGEEEEDEEEEEEEEEEEDEEEEEESITLALTTEPITEPTTEPTTT
TTTTTTTRAPRRRTPAPTTTYPATLRPRAPATSPPSPSQGPDSSSETPSSPALSPAVETE
NWGGVFDTTVSNDVGGAGPSGDFEIREEEELNNNKVMRAVTKPTVKKAEPDLLGNTIDTG
SSAAQLPQRNILERKEVLIAVIVGGVVGALFAAFLVMLLIYRMKKKDEGSYTLEEPKQAT
VSYQKPDTQEEFYA
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgcctagaaccctgcagcagcaggcgtaccgctggaggcgagggtcggaggagagcacc
ccggaggaccaggagagctccggcggcgatgacttcttcgacgatgaggatcgcttctcg
ggctcaggctccggctacccagagctggatgtggaggtgaagagcgaggtgctgttcagg
acagaggagccggtgatcatctccaccacccaggccctgtccccagtcccctccgctccc
ccagcagccctgccagtgcaccccacaccagaggagaccagcaccatccccatggcaaca
accacctccgtgacaaccacagtgaggcaaaccccgcccaccccaagctccggcccaccc
gaaagcaccacgcagctgcaggaggcggtgctggagccaatcggaggggaggaagaggag
gacgaggaagaggaagaggaggaggaggaggaggaagatgaggaggaggaggaggaaagc
ataacactggctctcaccaccgagcccattacagaacctaccacagaacccaccaccacc
accactactacaaccaccactagggccccccgcaggcgcacccctgcccccacaaccaca
taccctgccacgttgcggccccgggcccctgccacgtctcccccctccccgtctcagggg
cccgactcctcctctgagacccccagcagcccagctctcagccccgcagtggagacagag
aactggggcggggtgttcgacacgacagtcagtaacgatgtgggcggggccgggcccagc
ggagatttcgagatccgagaggaggaggagcttaacaacaacaaggtcatgagggccgtc
accaagccgaccgtcaagaaggcggagcctgacctgctcggcaacaccatcgacacaggc
agctccgccgctcagcttccccagaggaacatcctggagaggaaggaggtgttgatagct
gtgatcgtaggtggagtggtgggcgctctctttgctgccttcctggtcatgctgctcatc
taccggatgaaaaagaaggacgagggcagctacacgctggaggagcccaagcaggccacc
gtcagctaccagaaaccagacacacaggaggagttctacgcatag
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