Polyodon spathula (Mississippi paddlefish): 121303275
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Entry
121303275 CDS
T07273
Name
(RefSeq) glutamate receptor ionotropic, kainate 3-like
KO
K05203
glutamate receptor, ionotropic kainate 3
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04080
Neuroactive ligand-receptor interaction
pspa04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121303275
04082 Neuroactive ligand signaling
121303275
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pspa04040
]
121303275
Ion channels [BR:
pspa04040
]
Ligand-gated channels
Glutamate (ionotropic)
121303275
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GFIT
Motif
Pfam:
ANF_receptor
Lig_chan-Glu_bd
Lig_chan
SBP_bac_3
PGM_PMM_II
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
121303275
NCBI-ProteinID:
XP_041089795
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Position
32:complement(1060534..1085900)
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AA seq
614 aa
AA seq
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MTNNCAGGIFELIEGAGGPLVSAEEQAFKFAVNNINRNRTLLPNTTLTYDIQRINIYDSF
EASRKACDQLSLGVVAIFGPSHSSSSNAVQSICNALEVPHIQVRWKHHPIDNRDTFYANL
YPDYSSLSLAILDLVQFLKWKTATVVYDDSTGLIRLQELIMAPSRYNIRLKIRQLPLDDD
ARPLLKEMKRSREFRIIFDCSHTMAAQILKQALAMGMMTEYYHYIFTTLDLYALDLEPYH
YCGVNMTGFRILNTENPHVASVVEKWSMERVQVAPKPESGLLDGIMTTDAALTYDAVHIV
SVSYQRAPQMTVNSLQCHRHKPWRFGGRFMNFIKEAQWEGLTGRMVFNKTSGLRTEFDLD
IISLKEDGLEKIGTWNPTDGLNVTEVSRGKGVNITDSLSNRSLVVTTILEEPYVMFKKSD
KALSGNDRFEGFCIDLLKELAHILGFMYEIRLVPDGKYGAQDEKGQWNGMVKELIDHKAD
LAVAPLTISSIREKVIDFSKPFMTLGISILYRKPNGTNNGVFSFLNPFSPDIWMYILLAY
LGVSCVLFVIARFSPYEWYDAHPCNPGSDIVENNFTLLNSFWFGIGSLMQQGKAASVISF
NLHPQNIVPDGSNV
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgactaataactgtgcaggaggaatctttgaacttatcgaaggagctgggggtccactt
gtaagcgcagaagagcaagcctttaaatttgctgtgaataacattaacagaaataggact
ttgctaccaaatactacattaacgtatgacatacaaaggataaatatctacgatagcttt
gaagcgtcaaggaaagcctgtgatcagctgtccttaggtgtagttgcaatatttgggcca
tctcacagctcttcatctaatgcggttcagtccatttgtaacgcactggaagtgccgcac
atacaagtgcgatggaaacaccatccaatagacaacagggacactttctacgccaatctg
tatccagactactcctcgctcagtctggccattctggatcttgtacagtttttaaaatgg
aagactgcaacggttgtttatgatgacagcactggtcttattagactacaggaactgata
atggccccctccaggtataacatccggttaaaaatacgacagctgcctctggacgacgac
gctaggcccctgttgaaggagatgaagaggagtcgcgagttccgcattatcttcgactgc
agtcacacaatggcagctcagattctaaaacaggctttggcgatggggatgatgacagaa
tactaccactacatctttacaactttggacctttatgcgcttgacttggagccgtatcat
tactgtggagttaatatgactgggttccggattttgaatacagaaaatcctcatgtagcc
tcagtggtggagaaatggtctatggagcgtgttcaagtagcaccgaagcctgaatcaggt
cttctagatggcattatgacgacagatgctgctcttacatacgatgctgttcatattgtg
tcggtttcctatcagagagcccctcagatgaccgtcaactctttgcagtgtcaccggcac
aagccctggaggttcggtggacgctttatgaattttatcaaagaggctcaatgggaagga
ttaactgggcggatggttttcaacaagaccagcgggctgcggacagagtttgatttggat
atcatcagtctgaaggaagatgggctggaaaagatcggaacgtggaaccccacagacggc
ctgaatgttaccgaggtttcaagggggaaaggggtgaacatcaccgactcgctctctaac
cgatcgcttgttgttactacaattctggaggaaccatatgtcatgtttaagaagtctgac
aaggcactttctggtaatgaccgatttgaggggttttgtattgaccttctgaaagaactg
gcgcatatcctcggatttatgtacgagattcgactggtgcctgatggaaaatacggcgcg
caggatgagaagggacagtggaacggcatggtgaaagaactaatagaccataaagctgac
cttgcagttgctcctctcactatttcctctatccgggagaaggttattgacttttccaaa
ccattcatgactctgggaataagcattctctacaggaaaccgaatgggacgaacaatggt
gttttctcctttctgaatccattctctcctgatatctggatgtacatccttctagcatat
ctaggtgtcagctgtgttctctttgtaatagccaggttcagcccttacgagtggtacgat
gcccatccatgcaatcctggatctgacattgtcgagaacaacttcactttgctgaacagt
ttttggtttggcattggatcgcttatgcaacaaggtaaagctgcctctgtcatttctttc
aacctgcacccccagaacattgtgcctgatggcagtaatgtataa
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