Polyodon spathula (Mississippi paddlefish): 121303341
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Entry
121303341 CDS
T07273
Name
(RefSeq) arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1-like
KO
K12488
Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121303341
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121303341
Membrane trafficking [BR:
pspa04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
121303341
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ArfGap
BAR_3
Ank_2
Ank
PH
Ank_4
SH3_9
Ank_3
SH3_1
Ank_5
SH3_2
PH_13
PH_3
DotA
Motif
Other DBs
NCBI-GeneID:
121303341
NCBI-ProteinID:
XP_041089893
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All DBs
Position
32:3935579..3972514
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AA seq
997 aa
AA seq
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MPERISIPEFVTVTSEDIASQVTSSFTSKMTKCKNTVACLEESLEADQATLQRMKKLIKA
IHSSGLSHVESKEQYIDILENLGNSHLSQDNNEVSTGFLNLAVFTREVAALFKNLIQNLN
NIISFPLDNLLKGELREGRLELKKQIEKSWKDYEIKVTKIEKERRERAKQLGVIKTEFSP
AEIAEDMEKERRAFQLHMTEYLLKTQELKVRQGPVLLQSLIKLFHAQLNFFQDGLKAAQN
LSPFVEKLAASVHTVRQEQDEETKQLIQVRDSLRSFLPVEQKEEHLNRKNSGNGYSIHQP
QGNKQYGTEKSGFLFKKSVGIRKVWQKRKCGVKYGCLTISHSTINRPPVKLNLLTCLVRP
NVEEKKSFDLITHNRTYHFQAEDEQECIIWVSVLQNSKEEALNTAFKGDQSQYQDNRLQE
LTKAVIAEVKQMPGNEVCCDCSAPDPTWLSTNLGILTCIECSGIHRELGVHYSRIQSLTL
DRLSTSELLLAVSIGNTRFNDIMETTLPNDAIKPIPNSDMNARKEYIVAKYVDRKYIQKS
NDENMWRLHDAIRNKNITALVQIYVEGEDLAKPVPMPNGQDLGETALHLAVRLADKSSLA
LVEFLIQNSASLEKKTAEGNTALHYSCLYSKTECLKLLLKGKAALQTVNGAGETALDIGK
RLNHTQCAELLEQAQVGKFNTQIHVEYIWETQQQDMYDSEDDLDERISPLQRSFKSPLPK
SPSQWSAGNTGVSNKTYENIEFLYKGSSSYSSSVENQAPPLPAKSIQRGCSDPQISSSAL
EGHPPLRRSSNPLSRPAHEATAARPSSNRHSPPLLEALVSRWSSAPKSPHEKSSRINRQS
VFWDNQSQSESRKSGLEQGQATHSPQAHLGPVSSEKTTSYRRSTSNGAVGKTPVTSPHIP
GSLEDLYNTNIGQPSVSPSATAPLPQPRKSVLASAPSKRVIALADCKVENTKELTFCKGE
VIVVTGVEDSHWWVGHIEGDSTRVGSFPVNYVLLIPE
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atgccggagcgaatcagcattcctgagttcgttactgtaactagcgaagacattgcttca
caggttacctcaagctttacttcgaaaatgaccaagtgcaagaacactgtcgcttgcttg
gaagagtctttggaggcagaccaggcgaccctacagaggatgaagaaactcatcaaggcc
atccattcatcaggactctctcacgtggagagcaaagaacagtatatcgatattctggag
aacctggggaacagccacctgtcccaggacaacaacgaggtgtccaccggcttcctcaac
ctagcggtgttcaccagggaggtggctgcgctcttcaagaacctgatccaaaatttgaac
aacattatctcattccctttggataaccttctgaagggagagctgagagaagggaggctg
gaattaaagaaacagattgaaaagagctggaaggattatgagataaaagtgacaaagatt
gagaaggagcggcgggagagggccaagcagcttggggtcatcaagacagagttctcaccg
gcggagatcgcagaggacatggagaaagagcgcagggctttccagctgcacatgacagag
tatcttcttaaaactcaggagctgaaggtcagacagggtcctgttctgctgcagagtctc
atcaaattgtttcacgcacagctgaattttttccaggatggtttgaaagcagctcaaaac
ctcagcccgtttgtggagaagcttgccgcgtccgtgcacacagtgaggcaggagcaggat
gaagagacgaagcaactgattcaggtccgggattccctgcgaagcttcctgccagtggag
caaaaagaggaacacttgaacagaaagaactctgggaacgggtacagcatccatcagccc
cagggaaacaagcagtacggcacagagaaatccggctttctcttcaagaagagcgtcgga
atcagaaaagtatggcagaagaggaagtgtggagtcaaatacggctgcctgacgatatca
cacagcactataaacagacccccggtaaagctgaaccttctcacctgcctggtgaggccc
aacgtagaagaaaagaagagcttcgacctcattacacataacagaacctaccatttccag
gcagaggatgagcaggaatgtatcatctgggtgtcggttctgcagaacagcaaagaagaa
gccttgaacactgccttcaaaggggatcagagccagtaccaggataacaggctgcaggag
ctcaccaaggccgtgatcgctgaggtcaaacagatgccgggcaacgaggtctgctgtgac
tgcagtgctcctgatccaacatggctatccactaacctgggtattctgacctgtatagag
tgttctggaattcaccgggagctgggcgtccactactcccggatccagtccctcacactg
gacaggctcagcacctcggagttactgcttgctgtcagcattggcaatacaagatttaat
gatataatggagacaaccttacctaatgacgccatcaaacccattcccaacagtgacatg
aatgccagaaaggagtatatcgttgccaaatatgtggaccgcaaatacattcagaagagc
aacgatgaaaatatgtggcgtcttcatgatgcaataaggaataaaaacatcactgccctg
gttcagatctatgtggagggggaagacttggcaaagccagttcccatgccaaatgggcag
gatcttggcgagacggcacttcacttggcagtgaggctggcagataagagctctcttgct
ctagttgaattccttatacagaacagcgcgagcctagagaagaagacggctgaaggcaac
acagcgctgcattacagctgcctgtacagcaagactgagtgtctcaagctgctactgaag
ggaaaggcagccctgcaaactgtcaatggagctggcgagactgcattggacataggaaag
cgtctaaaccacacacagtgtgcagagctgctggagcaggctcaggtggggaagttcaac
actcagatccacgttgagtacatctgggagactcagcagcaggacatgtacgacagtgag
gatgaccttgacgaaaggatcagtccgctacagaggtcttttaagtctccactccccaag
tcgcccagtcagtggagcgcgggaaacaccggtgtgtccaacaagacttatgagaacatc
gagtttctttacaaaggctcatcctcgtactccagctctgtggaaaaccaggctcctcca
ctgccagccaaaagcatccaacgaggctgctcagacccccagatctcctcctcggctctg
gaaggtcaccccccgctccgacgctcctcgaacccgctgtcccgtccagcgcatgaagcg
acagctgctcgtccgtcttccaaccggcacagcccccctctgctggaggccttggtgtcc
cgctggtcatcggcccccaagtcccctcacgagaagagctcacgcataaaccggcagagc
gtgttctgggataaccagtcccagtctgagtcccggaagagtgggctggagcagggacag
gcaacccacagcccacaggctcacctggggccagtcagctctgagaagaccacatcgtat
aggcggtctaccagcaatggggctgtggggaagaccccagtgacctccccccacatccca
gggagcctggaggatctgtacaacaccaacatcggacagccttcggtatcgccgtcagcc
acagctccactgccacagccaaggaagtctgtgctggccagtgccccatcgaagagggtc
atagccctggccgactgtaaagtggagaacactaaggaactgacattctgcaaaggggag
gtgatagtcgtcacaggagtggaggattcacactggtgggttggtcatattgaaggagac
tcaacaagagtaggatcattccctgtcaactatgtgctccttataccagaatag
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