Polyodon spathula (Mississippi paddlefish): 121303342
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Entry
121303342 CDS
T07273
Symbol
sfpq
Name
(RefSeq) splicing factor, proline- and glutamine-rich isoform X1
KO
K13219
splicing factor, proline- and glutamine-rich
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pspa01009
]
121303342 (sfpq)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pspa03021
]
121303342 (sfpq)
03041 Spliceosome [BR:
pspa03041
]
121303342 (sfpq)
Protein phosphatases and associated proteins [BR:
pspa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
121303342 (sfpq)
Transcription machinery [BR:
pspa03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
121303342 (sfpq)
Spliceosome [BR:
pspa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
121303342 (sfpq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
NOPS
RRM_7
RRM_5
Motif
Other DBs
NCBI-GeneID:
121303342
NCBI-ProteinID:
XP_041089894
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All DBs
Position
32:7333911..7341293
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AA seq
583 aa
AA seq
DB search
MSRDRFRSRGGFQRRGGGGGRGGIGAGNPFRNQNQFQNRSNQNQLQPSQQNQQSPAQKPP
APPAPLPPAAAPLQQPLPAKPAQTPPPPAALKSLSPPAAGAKTQPPKPGPAAPLNQGASQ
KQSLPQAGQGNGKMPQQASPGPNLPKPPNQQPDPKQDGVRADPQQGLRATLAMLRRPGEK
TYTQRCRLFIGNLPADITDEEFKKLFAKYGEPSEIFMNKAKGFGFIRLESRALAEIAKAE
LDDTPMKGRQLRVRFATHSAALSIRNLSPYVSNELLEEAFSQFGQVERAVVIVDDRGRST
SKGIVEFASKPAARKALERCCDGVFLLTTSPRPVIVEPLEQFDDEDGLPEKLAQKNPMYQ
KNRSSYEMEREQPPRFAHPGSFEYEYSQRWKSLDEMEKQQREQVEKNIREAREKLEGEME
DAYHEHQANMLRQDLLRRQEELRRMEEMHSQEMQKRKEMQLRQDEERRRREEEMVLRQRE
MEEQMRRQRDDPYRMGGFMDNQREREMRMSGGGAGPMGMADSAYGSSTQKFPMGGMGFES
HQAMGAGAPGGAVMGSDMMRAIVQLLLLNLLRRTSFILPHSVH
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgggacaggtttaggagccgcggcgggtttcagaggcgcggcggcggcggaggc
cgcggcggtatcggcgccgggaacccgttcagaaaccagaaccagtttcagaaccgcagc
aaccagaaccagctgcagccttcgcagcagaatcagcagagcccggcgcagaagccgccc
gctcccccggccccgctgcctcccgccgccgctcccctccagcagcccctcccggccaag
ccggctcagacccccccgccgcccgctgcgctgaagagtctctctccgccggccgccggg
gcgaagacccagccccccaagccgggccccgccgccccgctgaaccagggcgcaagccag
aagcagagcctgccccaagcgggccaaggaaacgggaagatgccgcagcaagcctccccg
ggaccgaacctgccgaaaccaccgaaccagcagccagacccgaaacaggacggcgtgaga
gccgacccgcagcagggtctaagagccaccctggcaatgctcagaagaccaggggagaag
acctacacccagcgctgccgcctcttcattgggaacctgccggcagacataaccgatgag
gagttcaagaagctgttcgcaaagtatggcgagcccagcgagatcttcatgaacaaggcg
aagggctttggcttcatcagactggagtctcgagccctggctgagattgccaaggcagag
ctggatgacacgcccatgaagggcaggcagctcagagtccgcttcgccacgcactcggcc
gcactttccatccgcaacctctccccctatgtctccaacgagctgctggaggaggccttc
tcccagttcggccaggtcgagagggctgtggtgatcgtggacgaccgcggcaggtccact
agcaagggcatcgtcgagttcgcctccaagccagcggcgaggaaagcactggagaggtgc
tgtgatggagtcttcctgctcaccacgtcccccaggcctgtcattgtggagcctctggag
cagtttgacgatgaagacgggctccctgagaagctggcccagaagaaccccatgtaccag
aaaaacagatcctcctatgaaatggagagggagcagcctccacgctttgcccaccccggc
tccttcgagtacgagtattctcagaggtggaagtccctggacgagatggagaagcagcag
agagagcaggtggagaagaacatccgcgaggcgcgggagaagctggagggggagatggag
gacgcctaccatgagcaccaggccaacatgctgagacaggatttgctgagacgccaagaa
gaactgaggcgcatggaagagatgcacagccaggaaatgcagaagcgcaaggaaatgcag
ctgaggcaggatgaggagcgtcgccggcgtgaggaggagatggtgctgcgccagagggag
atggaggagcagatgagacgccagagagacgacccctacaggatggggggcttcatggat
aatcagcgggagcgtgagatgaggatgagtggaggaggagcgggccccatgggcatggca
gattcggcgtatggttccagcacccagaaattccctatgggtggcatgggatttgaaagc
caccaggcgatgggggctggagcaccaggcggagcggtgatgggcagtgacatgatgaga
gcgattgtgcaactcctgcttttgaacttgctgcgtaggaccagcttcatccttccccac
tcggttcactga
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