Polyodon spathula (Mississippi paddlefish): 121303375
Help
Entry
121303375 CDS
T07273
Name
(RefSeq) polycomb protein SCMH1-like isoform X1
KO
K11461
polycomb protein SCMH1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
121303375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pspa03036
]
121303375
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
PRC1.4 specific proteins
121303375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBT
SLED
RBR
SAM_1
SAM_2
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
121303375
NCBI-ProteinID:
XP_041089968
LinkDB
All DBs
Position
32:complement(4923669..4952994)
Genome browser
AA seq
648 aa
AA seq
DB search
MRKPGPQKVIEWKDGRRHKHARSGRPSSIPPQYQGHFSWDKYLKETGSVAAPAHCFRQCL
TPPVNEFKSGMKLEAQDPRNTTSTCIATVVGLTGVRLRLRLDGSDNKNDFWRLVDSSEIQ
PIGNCEKNAGMLQPPLGFRLNASSWPMFLLKTLNGAEMAPVRIFHKEPPAPAQNSFKVGM
KLEAVDRKNPHFICPATIGEVRGGEVLVTFDGWRGAFDYYCRYDSRDIFPVGWCALTGDN
LQPPGTKVVLPKCPGTPLELSSERGSMHPAGRGAPGQRGRKPGRPRGRLPGRLPGIWLHK
GAAGQHSAAGKQVEPVKIPKKRGPKPGSKRKPRVVPNPIPTSPTSSTPEPDTSTVPLDNA
TIPSAALQAPTVCVYLNKNGNMGPHLDRKKVQQLPDHFGPARASVVLQQAVQACIDCAHH
QKTVYSFLKQGNGGELISASFEHEQHTLTLPAVNSVTYVLRFLEKLCHNLRSDNLFGNQP
FTPSSAALHCPLEYDSGAYLPAEPFLLENGFPGPPEHRMDSLDSALTTVNQASPARSFRS
PFRSLNQSGSPSATLRRLSSGGSERFLGSSPRSSSRDPNLWTVEDVMQFVRDTDPQLGPH
ADLFRKHEIDGKALLLLRSDMMMKYMGLKLGPALKLTYHIDRIKQGKF
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaaccaggacctcagaaagtgattgagtggaaggatggcagacgacacaaacac
gcccgcagtggacgcccatccagcatccctccccagtaccaggggcacttcagctgggac
aagtatctgaaagagacggggtccgttgcagctccagcacactgcttcagacagtgctta
acccccccggtgaatgagttcaagtccgggatgaagctggaggcccaggaccctcgcaac
accacctccacctgcatagcaaccgtcgtcgggctgaccggggtcaggctccgcctccga
ctggacggcagcgacaacaagaacgacttctggcgattggtcgactcctcggagatccaa
ccaatcggcaactgcgagaagaatgcgggcatgctgcagccacctctgggcttccggcta
aacgcttcctcgtggccgatgttccttttgaagactctaaacggagccgagatggcgcct
gtccggatattccacaaggagccccctgctccggctcagaactccttcaaggtgggcatg
aagctggaggcggtggaccgcaagaaccctcacttcatttgcccggccaccatcggggag
gtgcgagggggtgaggtgctggtcaccttcgacggctggagaggagccttcgattactac
tgtcgctacgactcccgcgacatcttccctgtgggctggtgtgctctgaccggagataac
ctgcagccacctgggaccaaggtcgtgctgcccaagtgccccggcacacccctggagttg
agctcggagcgcggcagcatgcacccggcgggcaggggggccccagggcagaggggccgt
aagcctgggcgcccgcgcggtagactgccagggagactgccagggatctggctgcataaa
ggagctgcaggccagcacagcgcagcgggcaagcaggtggagccagtcaagatacccaag
aagagagggcccaaaccaggcagcaagaggaaacctcgcgtggtgcccaaccccataccc
acctccccaaccagcagcacccccgaaccagacaccagcactgtgcccctggacaatgcc
accatccccagcgctgccctgcaggcacccactgtgtgcgtgtacctgaataagaacggc
aatatgggaccccacctggaccggaagaaggtccagcagcttccagaccacttcggaccg
gcgcgcgcctcggtggtgctgcagcaggctgtccaggcctgcatcgactgtgcccaccac
cagaaaacagtgtactccttcctgaagcagggcaacggaggagaactcatctcagcctcg
tttgagcatgagcagcacactctgaccctgcccgcggtgaacagcgtgacctatgtcctg
cgcttcctggagaagctgtgtcacaacctgcgcagcgacaacctgtttggaaaccagccc
ttcacccccagcagtgccgcgctgcactgccccctggagtacgacagcggcgcatacctc
ccagcagaaccattcctgctagagaacggtttcccagggccccctgagcaccggatggac
agtctggactctgcgctgaccactgtgaatcaggccagtcctgccaggagcttccggtca
cccttcagatcactgaaccagagcggcagcccttcagccacgctgcggagactgagctcg
ggaggttcggagcggttcctggggtccagccctcgctccagcagcagggaccccaatctc
tggacggtggaggacgtcatgcagttcgtacgggacactgacccccagctcgggccgcat
gcagacctcttccggaaacacgagattgacggcaaagctctactgctgctacgcagcgac
atgatgatgaaatatatgggcctgaagctaggcccagccctcaaactcacctaccacata
gacagaatcaagcagggcaagttctga
DBGET
integrated database retrieval system
