Polyodon spathula (Mississippi paddlefish): 121303397
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Entry
121303397 CDS
T07273
Symbol
pum1
Name
(RefSeq) pumilio homolog 1 isoform X1
KO
K17943
pumilio RNA-binding family
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
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Gene cluster
GFIT
Motif
Pfam:
PUF
PUF_NOP9
NADase_NGA
Motif
Other DBs
NCBI-GeneID:
121303397
NCBI-ProteinID:
XP_041090003
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All DBs
Position
32:956671..1463751
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AA seq
1204 aa
AA seq
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MSVACVLKRKAVLWQDSFSPHLKQYPLETSHLSMPVVLTTGAGAPPSGQAPQAAPPSQPL
PAGAHSGQAPGSAGGAGRSQDDAMVDYFFQRQHGEQPGGGGYNNSKHRWPTGDNIHSDNQ
VRSMDGLNHDFQALALEGRAMGEQLLPGKKFWESDDSSKDGPKGIFLDQWRDCAWGASDH
SVSQPIMVQRRPGQGFHGSSEVGSVLSPRSESGGLGVSMVEYVLSSSPGEKLDSCLRKGA
YGPRDPEAEEHEKREKKTKTTYDGDKLGDLKEVEGDGMEKPNGLPVQNGIDVDVKDFSRT
PGNCPPPGSEVDLMGPSQNGLEGLAQLGNSNGAKQVEDFHSVESHNMQLDHMESVGMEPL
QFDYSGNQLPMDSATAATVGLFDYNSQQQLFQRPSALAVQQLTAAQQQQYALAAAQQPHI
GVFSAGLAPTAFVQNPYIISAAPPGTDPYAAGLAAAATLGPAVVPHQYYGVTPWGVYPAN
LFQQQAAAAAAATNSANQQAASQNQQGQQQVLRAGGNQRPLTPNQSQQGQQNDQLVAAAA
VNSALAFGQGLAAGVPGYPVLAPAAYYDQTGALVVNAGARSGLGGPVRLMGPAPLLISPS
AAQAAVAAAAAAASASGANGGLAGGASGPFRTLGNQQPQPQQQPGSNLASSSFYGNSSLN
TSSQSSSLFSQGSGQPGNNSLGFGGSSSLGATLGSTLGGFGTAVPNSNTSSGSRRDSLTS
SSDLYKRASNSLTPIGHSFYNGLGFSSSPGPVGMPLPNQGPSHSLTPPPSLSTHGSSTSL
NLGGLTNGSGRYISAAPGAEAKYRSASSGSSLFSPSSQLFPSSRLRYGMSDVMPSGRSRL
LEDFRNNRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAERQLVFNEILQAAYQL
MVDVFGNYVIQKFFEFGSLDQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQVI
SEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPHSLQFIIDAFKSQVFALSTHPYGCRVI
QRILEHCLPEQTLSILEELHQHTEQLVQDQYGNYVIQHVLEHGRAEDKSKIVAEIRGNVL
VLSQHKFASNVVEKCVTHASRSERAMLIDEVCSMNDGPHSALYTMMKDQYANYVVQKMID
VAEPTQRKIVMHKVGCWRNEQIRPHIATLRKYTYGKHILAKLEKYYMKNGVDLGPMCGPP
NGIM
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttgcgtgtgtgttgaagagaaaagcagtgctctggcaggactccttcagcccc
caccttaaacagtaccccctcgagacgagccatctcagcatgcctgtggtgttgacgacg
ggagcaggtgcgcccccctcggggcaagccccccaggccgcgccccccagccagcccctc
cctgcgggtgcacactcgggacaggcgcccgggtctgcggggggggccggccgctcgcag
gacgacgccatggtcgactacttcttccagaggcagcatggagagcagcctgggggaggg
ggctacaacaacagcaagcaccgctggccaaccggcgacaacatccactcggacaaccag
gtgcgatcaatggatgggcttaaccatgattttcaagctctggcactcgaggggagagca
atgggagagcaactcttgccaggcaagaagttctgggagtcggacgattcaagtaaagac
ggaccaaaagggatatttcttgaccagtggagggactgtgcatggggggcctcggatcat
tcggtctctcagccaatcatggtgcagcggcggcctggccaaggtttccatggcagcagt
gaggtgggctctgtgctgtctccacggtcagagagtggagggctgggggtcagcatggtg
gagtatgtcctgagctcgtccccaggggagaagctcgactcctgcctcaggaagggagct
tatgggcctcgagacccggaagcagaggaacatgaaaagagagagaaaaagaccaagact
acttacgacggggataaactaggagacttgaaggaagtggagggcgatggcatggagaaa
ccaaacggactgcccgtgcagaatggcattgacgtggacgtgaaggatttcagccgcacc
ccagggaactgcccgccccccggcagtgaggtggacctcatgggccccagtcagaacggc
ttggagggactggctcagctgggcaacagcaacggagccaaacaggtggaggacttccac
agcgtggagtcccataacatgcagctggaccacatggagtctgtgggcatggagcccctg
cagttcgactactccggcaaccagcttcccatggactcggccacagcagccactgtgggg
ctgtttgactacaactcccagcagcagctgttccagagacccagtgccctggcggtccag
cagctgacagcagcacagcagcagcagtatgccttagcagctgcccagcaaccacacata
ggtgtgttttcagcaggtcttgctcccaccgcttttgttcaaaacccgtacatcatcagt
gcagcccccccaggaacggacccctacgcagcagggctcgctgcggccgccacgctaggc
ccagcagtggtcccccaccagtactatggagtcaccccctggggagtatatccagccaac
ctctttcagcagcaggctgcagctgctgctgcggcaaccaactctgccaatcagcaagca
gcatcccagaatcagcagggccagcagcaggttctccgtgcaggtggcaaccaacggcct
ttgaccccgaaccagagtcagcaggggcagcagaacgaccagctggtagcggccgccgct
gtgaactcagcccttgcctttggacaggggctggcggccggagtgccaggctatccagtt
ctggcgccagctgcctattatgaccaaacgggagccctggtggtgaatgcaggggcacgg
agtggactggggggcccggttcggcttatgggcccagcaccactcctcatcagtccttca
gctgcacaggcagcggtggcagcagcggcagcagcagcctctgccagtggtgcaaatgga
ggtctggctggaggagccagcgggcccttccggaccctgggtaaccagcagccacagccc
cagcagcagccaggcagcaacctggcctctagctccttctacgggaacagctctctgaat
accagctcccagagcagctccctcttctcacagggctccggccagccagggaacaactcg
ctgggcttcgggggcagcagctctcttggagccacgctgggatccacactggggggcttt
ggcacggcagttccgaactcgaacaccagcagtggctctcgtcgggactccctgaccagc
agctcggatctctacaagcgggcctcgaacagcctaacacccatcggccacagcttctac
aatgggctgggcttctcctcatccccggggccggtgggcatgccactgcccaaccaggga
cccagccactcgctgactccacccccctcgctgtccacacacgggtcctcaaccagcctc
aacttgggtggtctgaccaatgggagcgggcgctacatctcggccgcgccgggggcggag
gctaagtaccgcagcgctagcagcggctccagcctgttcagccccagcagccagctcttc
ccgtcctcacggctccgctatggcatgtccgacgtcatgccctcgggacgcagccgcctg
ctcgaggacttccgcaacaaccgctaccccaacctgcagctgcgcgagatcgcagggcac
atcatggagttctcccaggaccagcacggctccaggttcattcagctgaagctggagaga
gccacacctgctgagcggcagctggtcttcaatgagatcctgcaggctgcctaccagctc
atggtggatgtcttcggaaactacgtcatccagaagttctttgagtttggcagcctggac
cagaagctggctctggcggagcgaatccgcgggcacgttctgtctctcgctctgcagatg
tatggctgccgggtgatccagaaagctctcgagttcattccctcagaccagcaggttatt
agcgagatggtacgagagcttgacggccatgtgctgaagtgtgtgaaagaccaaaacggg
aaccatgtggtgcagaagtgcatagagtgtgtgcagcctcactccttacagttcatcatc
gacgctttcaagagccaggtgtttgccctgtccacccacccgtacggctgtcgtgtgata
cagcgaatcctggagcactgcctgcctgagcagaccctgtccatcctggaggagctgcac
cagcacaccgagcagctagtgcaggaccagtatggaaactatgtgattcaacatgttctg
gagcatgggcgtgcagaggacaagagtaagatagtggctgaaatccgaggcaatgtcctg
gttctgagccagcacaagtttgccagcaatgtggtggagaagtgtgtgacccacgcctcc
cgctccgagcgagccatgctgatcgacgaggtgtgcagcatgaacgatggccctcacagt
gccttatacaccatgatgaaggatcagtatgctaactacgtggtgcagaaaatgatcgac
gtcgctgagccaacccagcgcaagattgtcatgcacaaggtaggctgctggaggaatgaa
cagatccggccccacattgccaccttgcgcaagtacacctacggcaagcacattctggcc
aaactggagaagtactatatgaagaacggtgtggacctggggcccatgtgcggaccaccc
aacggtatcatgtga
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