Polyodon spathula (Mississippi paddlefish): 121303413
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Entry
121303413 CDS
T07273
Name
(RefSeq) protein argonaute-1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pspa03019
]
121303413
03036 Chromosome and associated proteins [BR:
pspa03036
]
121303413
Messenger RNA biogenesis [BR:
pspa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
121303413
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
121303413
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
121303413
microRNA pathway
RISC loading complex
121303413
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoMid
PAZ
ArgoN
ArgoL1
ArgoL2
Motif
Other DBs
NCBI-GeneID:
121303413
NCBI-ProteinID:
XP_041090049
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All DBs
Position
32:7519687..7534809
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AA seq
859 aa
AA seq
DB search
MDPGTPGAGLAGPFLSQQLQQVFPAPHRPGLGSIGKPIKLLANYFQVDIPKMDVHHYEVD
IKPEKCPRRVNREVVEYMVQHFKPQIFGERKPVYDGKRNIYTVRALPIGTEQVDFEVTIP
GEGKDRIFKVSIKWVAMVSWRLLHDALVSGRVPVPLDSVQALDVAMRHLSSMRYTPVGRS
FFSPPEGYYHPLGGGREVWFGFHQSVRPAMWNMMLNIDVSATAFYKAQPVIEFMCEVLDM
RSVGEQPRSLSDSQRVRFTKEIKGLKVEVTHCGQMKRKYRVCNVTRRPASHQTFPLQLEN
GQAMECTVAQYFKQKYSLQLKYPHLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQ
TSTMIKATARSAPDRQEEISRLMKNGSYNLDPYIQEFGIKVKDDMVEVMGRVLPAPILQY
GGRNRAIATPNQGVWDMRGKQFYNGIEIKVWAIACFAPQKQCREEVLKGFTDQLRKISKD
AGMPIQGQPCFCKYAQGADSVEPMFRHLKNTYSGLQLIIVILPGKTPVYAEVKRVGDTLL
GMATQCVQVKNVVKTSPQTLSNLCLKINAKLGGINNILVPHQRSAVFQQPVIFLGADVTH
PPAGDGKKPSITAVVGSMDAHPSRYCATVRVQRPRQEIIQDLASMVRELLIQFYKSTRYK
PTRIIFYRDGVPEGQLPQILHYELLAIRDACIKLEEEYQPGITYIVVQKRHHTRLFCADK
IERIGKSGNIPAGTTVDTSITHPFEFDFYLCSHAGIQGTSRPSHYHVLWDDNCFTADELQ
LLTYQLCHTYVRCTRSVSIPAPAYYARLVAFRARYHLVDKDHDSGEGSHISGQSNMRDPQ
ALAKAVQVHQDTLRTMYFT
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atggacccgggaacgcctggagccgggctggcgggtcccttcctgtcccagcagctgcag
caggtgtttccggctcctcaccggccggggctcggctccatcgggaagcccatcaagctg
ctggcaaactacttccaggttgacatccccaagatggacgtgcaccactacgaggtggac
atcaagccagagaaatgtccccggcgtgtcaacagggaggtggtggagtacatggtgcag
catttcaaacctcagatctttggcgagaggaagccggtctacgatggaaagaggaacatc
tacacagtgagagcactgcccattggcacagagcaggttgatttcgaggtgacgatccct
ggcgaagggaaggaccggatattcaaggtgtcgatcaagtgggtggcgatggtgagctgg
cggctgctgcacgacgcgctagtcagcggccgggtccctgtcccactggactctgtgcag
gcgctggacgtggccatgcgccacctctcctccatgaggtacactccagtggggcgctcc
ttcttctcccctcccgaggggtactatcacccgctgggcgggggcagggaggtgtggttt
gggttccatcagtccgtgcggcccgccatgtggaatatgatgctgaacatcgacgtgtca
gccactgcgttttacaaagcccagcctgtgattgagttcatgtgtgaggtgctggatatg
cggagcgtcggcgagcagcccagatccctgagcgattctcagagggtgcgattcacaaag
gaaatcaaaggtctgaaggtggaggtgactcactgtgggcagatgaagaggaaataccga
gtgtgcaacgtgacccgccggcccgccagccaccagacgttccctttgcagctggagaac
ggccaggcaatggagtgcactgtggctcagtacttcaaacagaagtacagcctgcagctc
aagtacccgcacctgccctgcctgcaggtgggccaggagcagaagcacacctacctgccc
ctggaggtgtgtaacatcgtagcggggcagcgctgtatcaagaaattgacggataatcag
acttccaccatgatcaaagcgaccgcgcgctcagcacccgacaggcaggaggagatcagc
aggctgatgaagaatggcagttacaatttggacccgtacatccaggagttcgggatcaag
gtgaaggatgatatggtggaggtgatgggcagagtgctgccagctcccatcctgcagtac
ggaggcaggaaccgagccatcgccacccccaaccagggcgtgtgggacatgcgggggaag
cagttctacaacggcatcgagatcaaggtgtgggccatcgcctgcttcgcaccgcagaaa
cagtgtcgcgaggaggtgctcaagggcttcactgaccagctgcgcaagatctccaaggac
gcggggatgcctatccagggccagccctgcttctgtaaatacgcgcagggcgctgatagc
gtggagcccatgttccgccacctgaaaaacacctactcagggctgcagctcatcatagtc
atcctgcccgggaaaacgcctgtctacgcggaggtgaagcgtgtgggagacactctcctg
ggaatggccactcagtgtgttcaggtgaagaatgtggtgaagacctccccccagaccctc
tccaacctctgcctgaaaatcaatgccaagctgggggggatcaacaacatcctggtcccg
caccagcgctctgcagtgttccaacagcctgtgatcttcctgggcgctgatgtcacgcac
ccccctgcaggcgacggcaagaagccctcgattactgcggtggtggggagcatggacgct
caccccagtcgatactgtgccacggtgagagtgcagcgcccccggcaggagatcatccag
gacctggcctccatggtgcgggagctgctcatccagttctacaagtcgacccgctacaag
cccaccaggatcatcttctacagagacggggtgccggaggggcagctcccacagatcctg
cactatgagctgcttgctatcagagacgcgtgcatcaagctggaggaggagtaccagcct
ggcatcacctacatcgtggtgcagaagcgccaccacacccggctcttctgcgctgacaag
attgagaggatcgggaagagtgggaatataccagcgggaacgacagtggacaccagcatc
acacacccgtttgagtttgacttctacctgtgcagccatgcagggatacagggcaccagc
cgcccctctcactaccacgtgttgtgggatgacaactgcttcactgcggacgagctgcag
ctcctcacctaccagctgtgtcacacgtatgtgcgctgcacccgctctgtctccatcccc
gcgcccgcttactacgcgcggctggtggctttccgagcgcgataccacctggtggacaag
gatcacgacagcggggaaggcagccacatctccgggcagagtaacatgcgagacccccag
gctctagccaaagcagtgcaggtgcaccaggacacgctgcggaccatgtacttcacctga
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