Polyodon spathula (Mississippi paddlefish): 121303418
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Entry
121303418 CDS
T07273
Symbol
matn1
Name
(RefSeq) cartilage matrix protein
KO
K19467
matrilin
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
121303418 (matn1)
Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
Von Willebrand domain-containing proteins
VWA domain-containing proteins
121303418 (matn1)
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Gene cluster
GFIT
Motif
Pfam:
VWA
VWA_2
Matrilin_ccoil
FXa_inhibition
VWA_3
EGF_CA
cEGF
EGF_3
Plasmod_Pvs28
Motif
Other DBs
NCBI-GeneID:
121303418
NCBI-ProteinID:
XP_041090054
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All DBs
Position
32:1598828..1621588
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AA seq
495 aa
AA seq
DB search
MQSVSSALLLFSLLFLSQEYGALGTETLRHAAAVSAGLCQTRPTDLVFILDSSRSVRPSE
YEQVKVFVSKVIESLNVGPNATRVGVVNYASHVKNEVSLKTHHNKAALLKAVSKIEPLST
GTMTGLAIQFAINVAFNEGEGARVGSPDVSKVAIIVTDGRPQDSVKDVSARAREAGIEMF
AIGVGRVDMHTLRQIASEPLEEHTDYVESYSFIEKLTQKFQEAFCMSDLCATGDHDCEQI
CISTPGSYKCACNDSFTLQEDGKSCRACSALATDVVFLIDGSKSVRPENFELVKKFINQM
IDKLDVSETKSHVGLVQYSSSVRQEFPLGRFNTKKDLKEAVKKMSYMEKGTMTGQALRYL
MDSSFTPSHGARPGVTKVGIVFTDGRSQDYIGEAAKKAKENGFKMYAVGVGNAVEDELKE
IASDPIAEHYFYTADFKTMNQIAKKLHLKVCEEENPCECENIVKFNTKVEEAIAALTKKL
DAVTKRIAKLEKRLV
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgcagagtgtatcatcagcgctgctgctcttcagcctgctattcctgagtcaggagtat
ggagccctggggacagagactctccgacacgctgctgccgtatcagccggcctgtgtcag
acgcgccccacagacctggtattcatcctcgactcatctcgcagcgtgcgcccctccgag
tatgagcaggtgaaagtcttcgtgtccaaggttatcgagtccctcaacgtgggccccaac
gccacccgcgttggcgtggtcaactatgccagccatgtgaagaacgaggtgtcgctcaag
acccatcacaacaaggccgccctgctgaaggcggtcagcaaaatcgagccgctgtccacc
ggcaccatgaccggccttgccatacagttcgccatcaatgtggccttcaacgagggcgag
ggcgcccgagtgggttccccggatgtcagcaaggtggcgataatcgtgacagacgggcgc
ccccaggacagcgtgaaggatgtgtccgcccgcgcccgcgaagctggcatcgagatgttt
gcgattggcgtgggccgcgtggacatgcacacactgcggcagatcgccagtgagccgctg
gaggagcacaccgactatgtggagagctacagcttcatcgagaaactcacacagaagttc
caggaggccttctgcatgtctgacctgtgtgccaccggagaccacgactgtgagcagatc
tgtatcagcacccccggctcctacaagtgtgcctgcaacgacagcttcaccctccaggag
gatggcaagtcctgcagagcctgcagtgccttagccacggacgtggtcttcctgatcgat
ggctctaaaagcgtgcggcccgagaactttgagctggtcaagaagttcatcaaccagatg
attgacaagctggatgtgtcagagacaaagtcgcacgtggggctggttcagtactccagc
tctgtgaggcaggagttcccactgggccgcttcaacaccaagaaggacctgaaggaagca
gtgaagaagatgtcctacatggagaagggcaccatgacgggccaggccctgcgttacctg
atggatagtagcttcacccccagccatggggcccggcccggtgtcaccaaagtgggcatc
gtcttcaccgacgggcgctcccaggactacatcggagaggccgccaagaaggctaaggag
aacgggtttaagatgtacgcggtgggggtggggaacgcagtggaggacgagctgaaggag
atcgcctccgaccccatcgcagagcattacttctacacggccgacttcaagaccatgaac
cagatcgctaagaagctgcacttgaaagtgtgcgaggaagagaacccatgtgagtgcgag
aacatcgtcaagttcaacaccaaggtagaagaagccatagcagcactaacgaaaaaattg
gatgccgtgacaaagaggattgccaagctggagaagcggctcgtttag
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