Polyodon spathula (Mississippi paddlefish): 121303500
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Entry
121303500 CDS
T07273
Name
(RefSeq) keratin, type I cytoskeletal 18-like isoform X1
KO
K07604
type I keratin, acidic
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pspa04812
]
121303500
04147 Exosome [BR:
pspa04147
]
121303500
Cytoskeleton proteins [BR:
pspa04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
121303500
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
121303500
Exosomal proteins of other body fluids (saliva and urine)
121303500
Exosomal proteins of colorectal cancer cells
121303500
Exosomal proteins of melanoma cells
121303500
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
MscS_porin
GAS
ABC_tran_CTD
Tox-ODYAM1
ATG16
REST_helical
WXG100
ANIS5_cation-bd
DUF4145
Motif
Other DBs
NCBI-GeneID:
121303500
NCBI-ProteinID:
XP_041090153
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Position
33:97467..107502
Genome browser
AA seq
425 aa
AA seq
DB search
MASTMSLRSYSTSRQSAYSSRSLRDSSWTQLKAPFASSSSFSLSTVGNGLNHLTGNGMGV
TSEKETMQCLNDRLANYLDKVRFLEKSNQELELKIRNVMAEKSPKYKDFSPMMAQAHALN
EEVRKMTLDNSRILLQIDNAKLTAGDFRMKWETECDLTQSVERDIQALKRVKAEYVGILS
SMQAQMDSMTEEIHFLKKNHKEEVAAIMARLSCEQVSVEVDAAQGPDLAAVLAELRSQYE
GVARKNKEDAEAWYQKKMETVTLEVQQNTGALQSATSEINEKKRILQSLEVELESLRKQV
NMLEGNLGETSHRYTVELERLQVRLTQLEAELATLRHDLQSNKMEYEQLLRIKESLQLEI
ATYRRLLEGEEVEKPAPPPPKSKYILKHCSALFTFCFNLVVTNGFYPHVRPNLVHRCLHH
QPTKC
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggcatccactatgtctctcagaagctactccaccagccgccagtctgcctactccagc
cgctcgctcagagacagctcgtggacccagttgaaggctcccttcgcctcctccagctcc
ttctccctgtccaccgttgggaatggattgaatcatctcacagggaacgggatgggggtc
accagtgaaaaggagaccatgcagtgtctgaacgaccggctggccaactacctggacaag
gtgcgcttcctggagaagtccaaccaggagctggagctcaagatcaggaacgtgatggct
gagaaatccccgaagtacaaggacttctcccccatgatggcacaagcccatgctctcaat
gaagaggtgagaaagatgaccttggataacagcagaatcttactgcagattgacaatgcc
aaactgacagcaggtgacttcagaatgaagtgggagacagagtgtgacctcacccagtca
gtggaaagagacatccaagccctgaagagggtgaaggctgaatatgtgggcatcctgagc
agcatgcaggctcaaatggatagtatgacggaggagattcacttcctcaagaagaaccac
aaggaggaagtggctgccattatggcccgcctgtcgtgtgagcaggtgagcgtggaggtg
gatgctgctcaaggtcctgacctcgctgctgtcctggctgaactgcgtagccagtacgaa
ggcgtcgcaaggaagaacaaggaagatgccgaagcatggtaccagaaaaagatggagact
gtcactctggaggtacagcagaacactggagccctgcagagtgccacgagtgaaattaat
gagaagaaacgtatcctgcagtccctggaggtagagctggaaagtctgcgcaagcaggtc
aatatgctggagggtaacctgggggaaaccagtcacagatacacagtggaactagaacgc
ctgcaggtgaggctaacccagctggaggctgagctagccacgctgcgccacgacctgcag
agcaacaagatggagtatgagcagctgctgaggatcaaggagagcctacagctcgagata
gccacctacaggcgtctgctcgaaggagaggaagttgaaaaaccagcacctcctccaccc
aagagtaagtacatattaaaacactgtagtgcactattcaccttttgttttaatttagtg
gtcaccaatggtttttacccccatgttcgtcccaatttggttcaccgctgcctgcatcat
cagcctacaaaatgttag
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