Polyodon spathula (Mississippi paddlefish): 121303554
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Entry
121303554 CDS
T07273
Symbol
cercam
Name
(RefSeq) procollagen galactosyltransferase 2 isoform X1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00310
Lysine degradation
pspa00514
Other types of O-glycan biosynthesis
pspa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
121303554 (cercam)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
121303554 (cercam)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pspa01003
]
121303554 (cercam)
Enzymes [BR:
pspa01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
121303554 (cercam)
Glycosyltransferases [BR:
pspa01003
]
O-Glycan biosynthesis
O-linked Gal type
121303554 (cercam)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
121303554
NCBI-ProteinID:
XP_041090254
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All DBs
Position
33:603338..627309
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AA seq
978 aa
AA seq
DB search
MLPVFLYVFLGAFSGLRGYFSEEKQPQESIIQKPTVVLAIIARNAAHSLPFYLGAIERLD
YPKDRISVWAATDHNIDNTTAILREWLTVMQIYYHNVEWRPMDQPTSYPGEMGPKHWTNS
RYEYLMKLKQAALNYAKKQWADYIMYVDTDNILTNPQTLSLMIAENKSVMAPMLDSQTAY
SNYWCGITPQGYYRRTAEYFPTRHRHRRGCYPVPMVHSTFLLDLRKEGVKKLAFHPPHPD
YSWPFDDIIAFAFSCRVSGVQMYLCNKQRYGYLNVPAKPHQTNEDDRGNFVHLQLEAMID
GPPMYPSEHVFLPPRHPDKMGFDEVYLINLRRRPDRRDRMVRSLYEQDIDVKVMDAVDGG
ALNSSDIKQLGVDLLPGYYDPFSGRTLTKGEVGCFLSHYSIWKEMVDLQLERAVVFEDDV
RFQGNFKKRLLRLMEEIDLVELDWDLIYLGRKEVNPTKEQPVENVRNLVEAGYSYWTLSY
VISLQGATKLLNAEPLSKMVPIDEFLPLMYDKHPKYQHKCDELEVREKDFSSELERLTKD
KKEIVSFLKRSLDQRADELADLTDRLIGLQQAKDAEKEACENQLAQLRHEFQESKDQLTS
ENMILAGKLASVEEFRVQKEELMGRLTRMEEQLEKQGQEHQTTISNLEKKAVVDRDRLKK
EMMVRVAAVAAEFRRVSDKQMAETTKRMIRENVSVTAQLSKSSSKSLELLQENQALKELE
ERQRQQLGVLEHGQKDLARRSLSNQKVVRILTEKCKEQQYVLQEYMEKEHEYDQLKSDHA
TLQQEVQVLRQELASRKDEQRVKHAEAEDLKRCLIAERQSRGQLERILKEAAFALKEALL
EAPSAMKEADPEIQTHVRRRQMMEKLLSLLDSAALLGVGPALKEFKKETVSLHEHRTEPG
SDSLSPLLKVPRLLPHYRIGDLGLVPRPEQTLSTTLSKAAPLSRSTQLELHKHLGQDSVA
SGTTAGRAAALLPEITAE
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atgttgcctgtgtttttgtacgtctttttgggggcattttcaggacttcgggggtatttt
tccgaggagaagcaacctcaggaatctatcatacagaaaccgacggtggtgctggccatc
attgcgcggaacgcagcgcattccctgccgttttatctgggagcgatagagagactcgac
tacccgaaagacagaatatccgtgtgggcggcgacagatcacaacattgacaacaccacg
gcaatcttgagggaatggctgacagtcatgcagatatactatcacaacgtggagtggaga
cccatggaccagcctacgtcctatccaggagagatggggcccaagcactggaccaacagc
agatacgagtacctcatgaaactcaaacaggcagccctcaactacgccaagaaacagtgg
gctgattacatcatgtatgttgacacagacaacatcctgacgaacccgcagaccctgagt
ctgatgatcgctgagaataagtctgtgatggcacccatgctcgactctcagaccgcctac
tccaactattggtgtggcatcaccccccagggttattaccgtcgcacagcagagtacttc
cctaccagacaccggcatcgccgcggctgctatcccgttcccatggtgcactccaccttc
ctgctggacttgcgcaaggaaggggttaagaagctggccttccaccctccccaccctgac
tactcctggcccttcgatgacatcatcgccttcgccttctcctgccgcgtctcaggtgtg
cagatgtacctgtgtaacaagcagcgctacggctacctgaacgtgccggcgaagccacac
caaaccaacgaggacgatcggggcaacttcgtacacctgcagctggaggccatgattgat
ggaccacccatgtacccctccgagcatgttttcctgcctcctcgtcacccagacaagatg
ggatttgatgaggtgtacctgattaacctgcgcagacgaccggaccgcagggacagaatg
gtgaggtcactctatgagcaggacatcgacgttaaagtgatggacgcagtggacggagga
gctctcaatagcagtgatattaagcagctgggggtggacctgcttcctgggtactatgac
cccttctcaggccggaccctgactaagggggaggtgggctgcttcctcagccactacagc
atctggaaggagatggtggacctacagctggaacgggccgtggtgtttgaggacgacgtc
cgtttccaaggcaacttcaagaagaggctgttgaggctgatggaggagattgaccttgtg
gagctagactgggacctcatatacctgggtcggaaggaggtgaaccccactaaggaacag
ccagtggagaacgtacggaacctggtggaggcgggctactcctactggaccctgtcctac
gtgatctcactgcagggcgcaacgaaacttctcaacgcagagccgctctccaagatggta
cccatcgatgagttcctgcccctcatgtacgacaaacaccccaaataccagcacaagtgt
gatgagctggaggtcagggagaaggactttagctctgaattggagcgcttgaccaaggac
aagaaggagattgtgtccttcctgaagcgctctctagaccagcgagcggatgaactggct
gacctcactgaccgtctcattggactccagcaggccaaggatgcagagaaggaagcctgc
gagaatcagctggcacagctccgacatgagttccaggagagcaaggaccagctcacctct
gagaacatgatcctggcggggaagctggcgtctgtggaggagttccgggtgcagaaggaa
gagctgatgggacggctcacgagaatggaagaacagctagagaaacaggggcaggagcac
caaaccaccatctctaacctggagaagaaggcagtggtggacagagacaggctgaagaag
gagatgatggtacgtgtggctgctgtggcggcagagttccgccgggtctcagacaagcaa
atggcagaaaccacaaagaggatgatccgggagaacgtgtctgtaaccgctcagctaagc
aagagctccagtaagagtctggagctgctgcaggagaaccaggccctgaaggagctggag
gagcggcagagacagcagctgggagtgctggagcacgggcagaaggacctggccaggagg
agcctcagcaatcagaaggtggtgagaatattgacagagaagtgcaaggagcagcagtat
gtgctgcaagaatacatggaaaaggaacatgagtatgaccagctgaagtctgaccatgcc
accctacaacaagaagtgcaggtcctaagacaggagctggcctcaaggaaagatgaacag
agagtgaagcacgcagaggctgaggatctgaagaggtgtctgatagcggagcggcagagc
aggggccagctggagagaatcctcaaagaggcagccttcgctctcaaggaggctctgctc
gaggcgccgtctgctatgaaggaggcggaccctgagatccagacccacgtacgcaggagg
cagatgatggagaagctgctttccctgctggacagtgccgctctactaggagttggacct
gctctgaaggaattcaaaaaggagacagtatctctccatgaacacagaaccgagcctggg
tcagacagtctctccccgctgctcaaggtccccagactcctgccacactacagaatagga
gaccttgggctggtccctcgaccagagcaaaccctctctaccaccctgagcaaagcggca
cctctctccaggagcacacagcttgagctgcataaacacctgggccaggattcagtggct
tcaggcacaacagcagggagagctgcagcactcctccctgagattacagctgaataa
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