Polyodon spathula (Mississippi paddlefish): 121303555
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Entry
121303555 CDS
T07273
Name
(RefSeq) LOW QUALITY PROTEIN: long-chain fatty acid transport protein 4-like
KO
K08745
solute carrier family 27 (fatty acid transporter), member 1/4 [EC:6.2.1.-]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03320
PPAR signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
121303555
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pspa01004
]
121303555
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pspa02000
]
121303555
Lipid biosynthesis proteins [BR:
pspa01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
121303555
Transporters [BR:
pspa02000
]
Solute carrier family (SLC)
SLC27: Fatty acid transporter
121303555
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
121303555
NCBI-ProteinID:
XP_041090257
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Position
33:complement(658975..677496)
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AA seq
643 aa
AA seq
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MLRLVSSTVLLFLLRLVLGLPWYQVLPSLLIFYLGSGGWQFADVFIKTIWRDLHAAGVLL
RVKLSVKRHLREGNTVPKIFASMVQLHGDKPALIFEGTGETWSFRQLDEYSNRVANLLLE
RGYREGDVLALFMENRSQYVGLWLGMAKIGVEAALINFNLRLDALVHCVNISNAKAVVFG
GELAGAVQEVHASMGRSVKLFCSGDWDPSKVPEETERLEPLLDAAPSHKPSPPNRGFTDR
LFYIYTSGTTGMPKAAIVVHSRYYRMAALVYYGFGMSSDDVLYDCLPLYHSAGNIVGVGQ
CLLHGMTVVIKRKFSASRFWDDCVKYNCTIVQYIGEICRYLINQPVREAEKQHRVRMALG
NGLRPSIWEEFTSRFNVPQIAEFYGATXCNCSLGNFSNKIGACGFNSRILPFVYPIRLVK
VDEETMELIRGPDGVCIPCKPGEPGQLVGRIIQNDPLRRFDGYVNQSATSSKISHDVFKK
GDSAYLSGDVLIMDQYGYMYFRDRTGDTFRWKGENVSTTEVEGTLSRLLDMTDVVVYGVE
VPGVEGRAGMAAIADPASGIDLERFARDLEKALPLYARPIFLRVLPEVNKTGTYKFQKTE
MRQQGFDPKVVSDRLYILDCSKGKYVPLDEEVYRNIQSGKQKL
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgttgaggttggtgagctccacagtcctgctctttctgctcaggctggttcttggcctg
ccttggtaccaggtcctccccagtctgctcatattctacctgggctccggtggctggcag
tttgccgatgtcttcatcaaaaccatctggagagacttgcacgcggccggtgttctcctc
agggtgaagctgagtgtgaagcggcacttgcgtgagggcaacactgtgcccaagattttc
gcctccatggtgcagctgcacggggacaagcctgcgctgatcttcgagggaactggcgag
acctggagcttccgccagctagacgagtactcgaaccgcgtggccaacctgctgctggag
cgggggtaccgcgagggggatgtgctggccctcttcatggagaaccgcagccagtacgtg
ggtctgtggctgggcatggccaagatcggggtggaggcggcactcattaacttcaacctg
cgcctggacgccctggtgcattgtgtcaacatctccaacgccaaggccgtggtgttcgga
ggagagctcgctggtgctgtgcaggaagtgcatgcttcgatgggcaggtcagtgaagctg
ttttgctccggagactgggatccatcgaaggttcctgaggagactgagagactggagccc
ttgctggatgcagccccctcccacaagcccagtccccccaacaggggcttcacagaccga
ctgttctacatttacacctctgggactacagggatgcccaaagccgctatcgtggtgcac
agcaggtattaccgcatggctgctctggtctactatggctttgggatgtcctccgatgat
gtgctgtacgattgcttaccgctgtaccattcggcagggaacatcgttggggttggacag
tgtctgctccatggaatgaccgttgtcatcaagcggaaattctccgcttcccgtttctgg
gatgactgcgtcaaatacaactgcacaattgtgcagtacatcggggagatctgccgatac
ctgataaatcagcctgtccgggaggcagagaagcagcaccgggttcgcatggcgctgggc
aatgggctgcggccgtccatctgggaagagttcacctcccgcttcaacgtgccccagatc
gcagagttctatggggccacatagtgcaattgcagcctgggcaacttcagcaacaagatt
ggtgcttgtgggtttaacagccggatcctgccctttgtgtacccgatccgactggtgaag
gtggacgaggagaccatggagctgatccggggtcccgatggagtctgtatcccctgcaag
ccaggggaaccagggcagcttgtaggtcgaatcatccagaacgaccccctgcgcagattc
gatggctacgtcaaccagtcagcgactagcagtaagatctcacatgacgtctttaagaaa
ggggacagcgcatacctctcaggtgatgtgctcatcatggaccagtacggctacatgtac
ttcagggaccgcacaggggacacgttccgctggaaaggagagaacgtgtccacgacggag
gtggaggggaccttgagccgcctcctggacatgacggacgtggtggtgtacggagtcgag
gtgccaggggtggaaggaagagcggggatggcagctatcgcagacccagccagtgggatt
gacttggagaggtttgccagggacctggagaaggcgctgcctctctatgcacggcccatc
ttcctcagagtgctgcctgaggtcaacaagacagggacctacaagttccagaagacagag
atgcgtcagcaggggtttgaccccaaggtggtctcggaccgactgtacatcctagactgc
agcaaagggaaatacgttccattggatgaggaggtctaccgcaacatccaatcagggaag
cagaagctgtga
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