Polyodon spathula (Mississippi paddlefish): 121303609
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Entry
121303609 CDS
T07273
Name
(RefSeq) protein crumbs homolog 1-like isoform X1
KO
K16681
protein crumbs
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
Laminin_G_2
Laminin_G_1
EGF_CA
Insulin_TMD
EGF_2
EGF_MSP1_1
EGF_DL_JAG
Motif
Other DBs
NCBI-GeneID:
121303609
NCBI-ProteinID:
XP_041090330
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All DBs
Position
34:4956698..5053566
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AA seq
1454 aa
AA seq
DB search
MEFGRKYFSSYCKTVLITMMMFKWDIFCTETLDMCLSAPCQNNGTCVNDLFDYNCVCPTE
PLKYSGRNCKELYDPCSQQPCASYRNCTSTLGTEEYHCNCPTGFTGTNCTININECDRNP
CIENKTECGDDCQSNITNCAAEPCLNNGSCIDRPEGYLCECTPGFSGERCEANINECQPS
PCRNGAICKDGVNEYHCFCVPGFQGYNCEIDINECASWPCKNNGSCINEKDHYVCTCLLG
FTGVNCEVEIDECESGPCQNGATCSDHVGLYTCICPEGFEGLDCQMDIDECASQPCHNGA
ACLDLVNGYVCNCSDTGFVGENCEIDIPECDSNPCFNNASCVEGVKNYSCLCWSGFEGHH
CELDIDECEEQPCQNGALCYERSKQIYYGELAEFEQEFSYRTAAGYLCHCQPGFTGKNCS
VNIDECASMPCQNRGSCEDLINGYQCLCEPGFTGVGCETNIDECESSPCANGGRCEDGID
DYTCLCPAAGQDATPWGGKNCDTQLVGCQENDCQNGATCHPTYQSGTHSYSCQCPPGFYD
ERCNTSTTFSFTSTGYILIEVPLRNRTKRGVGTTRASISLRFRTTLPDRIIFYRGDYSDY
MYLEIVEGLLHARAVLEGSRIYASLPGKVNDGQWQEISVTLKGGLVLTHTNCERGDCTKT
QDGSELVRNIPESFKMISVGGVKSEFLLNNTESRTNFIGCIEDLRIDSQPVLPQRISETM
AEGLQLGCSKPEWCEPNPCSDQGSCVDLWTGSRCHCYRPFHGPNCSNEYTPATFSQEDST
SSTSFNISSSHGSNFTVSFFLRTLKQEGLIFQLRNDTGPYFTLYLKMGRINVQILSGPPA
VAPMYCANGEKQLLTVQSNDGNVTVGQYHLDYKLTRLPSISVKAGDVAHVGGLSVEEDAS
AWGGYFKGCLQDLRLDNSLLEFFPLENGNSSATEDMYGFRETVNVMQGCHSDDTCRSGPC
ENGGSCQVTWNDFVCSCLANFTGRTCERRVWCSSSPCPHLSQCVDVPGGYECRANATFQE
NNTIEFAANKSLNLPVTSISLDVRTRDGNAVLLRATNRVELFCIGLHNSTLLVKLRTENS
VEIVTIQSDFPITDGLWHKIMVSMTEPKQGSSRWVITVDGNQNGTSLGVAGNLNFLNEST
VMLAENYTGCLGTVRVGGVYLPFTEDHTVPQREQFIKRSGQEIQIGCRGNPVCTPNPCYH
EGKCEDLFNFFECSCPHGWGGLYCQSNIDDCQSSPCLHGNCTDLLAGYKCDCYPGYTGGN
CETNLDDCAENLCQNGGMCSDGIDTFSCACPPQFAGPLCQWPSPPLQCGKEFWCQNDGYC
EDGIWGANCTCRTGFTGESCETDINECTPNPCLNGGTCQDLVNGYECSCGASYAGQRCEA
DKLEQTDTIPVVAIAVPVVCGCFLLLIIGLIFMVLTARKRRQSEGTYSPSQQEVAGARLE
MGSVFKVPPEERLI
NT seq
4365 nt
NT seq
+upstream
nt +downstream
nt
atggagtttgggagaaagtatttcagctcttactgtaaaacagtacttattaccatgatg
atgttcaaatgggatatattctgtactgaaaccctggacatgtgtttatcagcaccctgt
caaaacaacggaacatgtgtgaacgatttatttgactacaactgtgtgtgcccgacggag
cctctgaagtatagtggcagaaactgtaaggagctctatgacccgtgttcacagcagccc
tgcgccagctacaggaactgtaccagcactcttggaacggaagagtaccattgtaactgc
ccaacaggcttcacgggcaccaactgcactattaatatcaacgaatgtgatagaaacccg
tgcatagagaacaagactgagtgtggggacgactgccagtctaacataaccaattgtgcc
gctgagccctgtcttaataatgggagctgcatcgaccgtcctgagggctacctgtgtgag
tgcacccctgggttcagtggggagcgctgtgaggccaatatcaatgaatgtcagcccagc
ccgtgcagaaacggagccatctgtaaggacggagtgaatgagtaccactgcttctgtgtg
cctggcttccagggctataactgtgagattgacatcaatgagtgtgcctcctggccctgc
aagaacaacgggagctgcatcaacgagaaggaccactatgtgtgcacgtgcctcctgggg
tttacaggagtgaactgcgaggtggagatagacgagtgtgagtccgggccatgtcagaac
ggtgctacctgcagtgaccacgtgggcctctacacctgcatttgtcctgagggcttcgaa
gggctggactgccagatggacatcgacgagtgtgccagccagccctgccacaatggagct
gcctgcctggacctggtcaatgggtacgtgtgtaactgcagtgacaccggcttcgtagga
gagaactgtgagattgatatccctgagtgcgactccaatccgtgcttcaataatgccagc
tgtgtggaaggagtcaagaactacagctgcctgtgctggagcggctttgaagggcaccac
tgtgagctggatattgatgagtgtgaagagcagccctgtcagaacggtgctctgtgctac
gagcgctccaaacagatctattacggggagctggcggagttcgaacaggagttcagctac
aggacagcagcaggatacctgtgtcactgccagccaggctttacagggaagaactgctct
gtgaacatcgatgagtgtgcctccatgccttgtcagaacagggggagctgtgaggatctc
attaacggataccagtgtctgtgtgaacctggctttacaggagtgggctgcgagaccaac
attgacgaatgtgaaagcagcccctgtgcgaatgggggccggtgtgaagacggcatcgac
gactatacctgcctctgccctgcagcaggacaagacgccaccccctggggaggcaaaaac
tgtgacacccagctggtgggctgccaggagaacgactgtcaaaacggagcgacctgccac
cctacctaccagagcggcactcacagctactcctgccagtgccccccgggtttctatgac
gaacgctgcaacacctcaaccacattttccttcacatccacaggctacattctcatagag
gttccactgagaaacagaaccaagaggggcgtgggtaccaccagagccagcatcagcctc
cggttcaggaccaccttacctgataggattatattttacaggggggactactcggactac
atgtacctggagattgtcgagggcctccttcatgctagggcagtgctagagggctctcgc
atctatgcatctctgcctggaaaagtaaacgatggccagtggcaggaaatcagtgtgact
ttgaaaggtggtttagtgctgacccatacaaactgtgagagaggagactgcacaaagacc
caggatggctcggaactggtccgtaatattccagagtccttcaagatgatctctgttggt
ggggtcaagtctgagttcttactcaacaacactgaaagcaggacgaatttcattggctgc
atagaagacctacggattgattcccaacctgtgcttcctcagaggatttctgagaccatg
gcagagggcttgcagctgggctgcagcaagccggagtggtgcgaacccaacccgtgctca
gatcagggcagctgtgtggatctgtggaccggctccagatgccactgctaccgtcccttt
cacggtcccaattgttctaacgagtatacaccagcaaccttcagccaggaagacagcact
agttccacctcctttaacatcagcagcagtcacggctccaacttcacagtttcctttttc
ctgcgcacgctgaagcaagagggcttgatatttcagctgagaaatgacacaggcccgtac
ttcaccctttatctgaagatgggcaggatcaacgtgcagatcctgtcgggccctcctgca
gtggcacccatgtactgtgccaatggagagaagcagctcctcaccgtgcaatccaatgat
ggcaacgtcacggttggacagtatcacctggattataaactgacccggctgccttccatc
tcagtcaaggctggggatgtagcccatgttggaggcctctctgtggaagaggatgcatcc
gcctggggagggtatttcaagggctgtttgcaggacctgcggctcgacaactcgctcctg
gagttcttccctctggagaacggtaactccagcgcaacagaagacatgtatggattcagg
gagactgttaatgtcatgcagggttgccacagcgatgacacctgccggtctggaccctgt
gagaatggaggctcgtgtcaagtgacctggaatgactttgtctgctcgtgtcttgcgaac
ttcaccggcaggacgtgtgaaaggagagtgtggtgcagcagcagcccctgtccacacctc
agccagtgtgtggatgtgcctgggggctatgagtgcagagcaaatgctacgtttcaggaa
aacaacactattgaatttgctgccaacaagtctctcaacttgccagtaacaagcatttcc
ctggacgtgaggaccagagatgggaatgcggttcttctgcgagccaccaaccgagtggag
cttttctgcattggactccacaactccacactgctggtcaagctgaggacagagaacagc
gtggaaatagtcaccatacagagtgacttccccatcacagacggcctgtggcacaaaatc
atggttagtatgacagaaccgaagcagggctcgtcgaggtgggtgatcactgtggacggg
aatcaaaacgggaccagcctgggcgtggctggcaacctcaacttcctcaacgaatccact
gtgatgctggctgagaattacacaggctgcctcgggactgtgagagtgggtggagtgtat
ctccctttcaccgaagaccacacagtaccacagcgggagcagtttatcaaacgcagcggg
caagagattcagatcgggtgcagaggaaacccggtctgcactccaaacccctgttaccac
gagggaaagtgtgaggatctgtttaacttctttgagtgcagttgcccccacggctggggt
gggctatattgccagtctaatattgacgactgccagtccagtccctgtctccatggcaat
tgtactgacttgctggctggctacaagtgcgactgttacccaggctacactggggggaac
tgtgaaacaaaccttgatgactgtgctgaaaacctgtgtcagaatggagggatgtgctct
gatggtatcgacactttcagctgtgcctgccctcctcagttcgcaggtcctctatgccag
tggccctccccgccattgcagtgtgggaaggagttctggtgtcagaacgatggatactgt
gaagatgggatctggggagctaactgtacctgcaggactggcttcactggagagagctgt
gaaactgatataaacgagtgcacccccaacccctgtctgaacggtggcacgtgccaggac
ctggtaaacggttatgagtgtagctgtggtgccagctatgcgggacagcgctgcgaggct
gataaactggagcagacagacacaatccccgtggtggcgatagctgtgccggtggtctgc
ggctgctttctgctcctgattatcggcctgattttcatggttctcactgcaaggaagagg
cggcagtctgaagggacctacagccccagccagcaggaggtggcaggggcccgtttggag
atgggcagcgtcttcaaagtgccaccagaagagcgcttgatctga
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